 |
Job Description | P0A877 | Confidence | 93.54% | Date | Thu Jan 5 11:07:06 GMT 2012 |
Rank | 416 | Aligned Residues | 84 |
% Identity | 11% | Template | c2i2xD_ |
PDB info |
PDB header:transferase | Chain: D: PDB Molecule:methyltransferase 1; |
PDBTitle: crystal structure of methanol:cobalamin methyltransferase complex2 mtabc from methanosarcina barkeri
|
Resolution | 2.50 Å |
|
 |
  |   |
139 | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | |
. | . | . | . | . | 210 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| . |
|
|
|  |  |  |  |
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
F | R | Q | A | A | L | R | H | N | V | A | P | I | F | I | C | P | P | N | A | D | D | D | L | L | R | Q | I | A | S | Y | G | R | G | Y | T | Y | L | L | S | R | A | G | V | T | G | A | E | N | R | A | A | L | P | L | N | H | L | V | A | K | L | K | E | Y | N | . |
A | A | P | P | L | Q | G | F | G | I | S | A | P |
Query Conservation |   |
  |   |   |   |   |   |   |   |
|
|   |   |
|   |   |
|
|
|   |
|   |   |   |   |
|   |   |   |   |   |   |
|   |
|   |
|
|   |   |   |   |   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |   | . |   |   |
|
|   |
|
|
|
|
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|   |   |   |
|   |   |
|   |   |
|
|   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |
|
|
|
|   |   |   |   |   |   | . | . | . | . | . | . |   |   |   |   |   |   |   |
|   |   |
|
|   |   |
|   |   |   |   |
|   |
|
|
|   |   |   |   |   |
Template Sequence |   |
V | T | A | L | L | R | A | N | G | Y | N | V | V | D | L | G | R | D | V | P | A | E | E | V | L | A | A | V | Q | K | E | K | P | I | M | L | T | G | T | A | L | M | T | T | T | . |
. |
. |
. |
. |
. |
M | Y | A | F | K | E | V | N | D | M | L | L | E | N | G | I | K | I | P | F | A | C | G | G | G | A | V | N | Q |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | T |
|  |  |  |  |  |  |  |  |  |
| T |  |  |  |  |  |  |  |  |  |  |
|
| S |  |  |  |  |  |
|
| S | T | T | T | . | . | . | . | . | . | T | T |  |  |  |  |  |  |  |  |  |  | T | T | T |
|
|
|
|  |  |  |  |
| T | T |
|
| T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
| . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
143 | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | |
|
|
|
|
|
. | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . |
  |
  |   |
218 | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | Q | V | K | A | A | I | D | A | G | A | A | G | A |
Query Conservation |   |
|   |
|   |   |   |   |   |   |
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
| . | . | . |
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   | . | . | . |
|
|
|   |   |
Template Sequence |   |
D | F | V | S | Q | F | . |
. |
. |
A | L | G | V | Y |
Template Known Secondary structure |   |
T | T | G | G | G | S | . | . | . | S | S |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  | . | . | . |
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
217 | . | . | 220 | . | . | |
|
|
. | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|