Job Description P0A877 Confidence 95.58% Date Thu Jan 5 11:07:06 GMT 2012 Rank 369 Aligned Residues 156 % Identity 17% Template c2a4aB_ PDB info PDB header:lyase Chain: B: PDB Molecule:deoxyribose-phosphate aldolase; PDBTitle: deoxyribose-phosphate aldolase from p. yoelii Resolution 1.84 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.			.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure																																																								.	.
Query SS confidence																																																								.	.
Query Sequence		V	T	L	G	D	P	G	I	E	Q	S	L	K	I	I	D	T	L	I	E	A	G	A	D	A	L	E	L	G	I	P	F	S	D	P	L	A	D	G	P	T	I	Q	N	A	T	L	R	A	F	A	A	G	V	.	.	T	P	A	Q	C	F	E	M	L	A	L	I	R	Q	K	H	P	T	I	P	I	G	L	L
Query Conservation																																																								.	.
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	P	Y	G	T	D	S	M	E	K	V	L	N	D	T	E	K	A	L	D	D	G	A	D	E	I	D	L	V	I	N	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	K	I	I	E	N	T	D	E	G	L	K	E	A	T	K	L	T	Q	S	V	K	K	L	L	T	N	K	I	L	K	V	I
Template Known Secondary structure		T	T	T			S																T		S									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						S																			T	T	T	S
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110																.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
		101	.	.	.	.	.	.	.	.	110		.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		M	Y	A	N	L	V	F	N	K	G	.	I	D	E	F	Y	A	Q	C	E	K	V	G	V	D	S	V	L	V	A	D	V	P	V	E	E	S	A	P	F	R	Q	A	A	L	R	H	N	V	A	P	I	F	I	C	P	P	N	A	D	D	D	L	L	R	Q	I	A	S	Y	G	R	G	Y	T	Y	L	L	S	R
Query Conservation												.
Alig confidence												.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	E	V	G	E	L	K	T	E	D	L	I	I	K	T	T	L	A	V	L	N	G	N	A	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	I	K	T	S
Template Known Secondary structure									S													T	T	T		S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.																																																			.	170	.	.	.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.									.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.				.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.																							.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.																							.	.	.
Query Sequence		A	G	V	T	G	A	E	N	R	A	A	L	P	L	N	H	L	V	A	K	L	K	E	Y	.	.	.	.	.	.	.	.	N	A	A	P	P	L	Q	G	F	G	I	S	A	P	D	Q	V	K	A	A	I	D	.	.	.	A	G	A	A	G	A	I	S	G	S	A	I	V	K	I	I	E	Q	H	I	N	E	P
Query Conservation																										.	.	.	.	.	.	.	.																							.	.	.
Alig confidence											.															.	.	.	.	.	.	.	.																							.	.	.													.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.																																																												.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	G	K	V	Q	I	N	A	T	.	P	S	S	V	E	Y	I	I	K	A	I	K	E	Y	I	K	N	N	P	E	K	N	N	K	I	G	L	K	V	S	G	G	I	S	D	L	N	T	A	S	H	Y	I	L	L	A	R	R	F	L	F	R	I	G	S	S	S	L	V	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			S		S	S					.																			G	G	G	T	T	T							S	S			S																					S	S			.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure											.																																																												.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		174	.	.	.	.	.	180	.	.		.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		249	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	M	L	A	A	L	K	V	F	V
Query Conservation
Alig confidence		.	.	.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	I	K	L	R	K	V	I
Template Known Secondary structure		.	.	.	.
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						251	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions