Job Description P0A877 Confidence 96.86% Date Thu Jan 5 11:07:06 GMT 2012 Rank 311 Aligned Residues 208 % Identity 14% Template c1zcoA_ PDB info PDB header:lyase Chain: A: PDB Molecule:2-dehydro-3-deoxyphosphoheptonate aldolase; PDBTitle: crystal structure of pyrococcus furiosus 3-deoxy-d-arabino-2 heptulosonate 7-phosphate synthase Resolution 2.25 Å

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.			.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure																										.	.						.
Query SS confidence																										.	.						.
Query Sequence		G	I	E	Q	S	L	K	I	I	D	T	L	I	E	A	G	A	D	A	L	E	L	G	I	.	.	P	F	S	D	P	.	L	A	D	G	P	T	I	Q	N	A	T	L	R	A	F	A	A	G	V	T	P	A	Q	C	F	E	M	L	A	L	I	R	Q	K	H	P	T	I	P	I	G	L	L	M	Y	A	N	L
Query Conservation																										.	.						.
Alig confidence																										.	.						.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template Sequence		S	R	E	Q	I	M	K	V	A	E	F	L	A	E	V	G	I	K	V	L	R	G	G	A	F	K	P	R	T	S	P	Y	S	F	Q	G	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	E	K	A	L	R	W	M	R	E	A	A	D	E	Y	.	G	L	V	T	V	T	E	V	M	D	T	R
Template Known Secondary structure																T	T							B	S	S				S	S	T	T	S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T															.	T										G	G
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.																.	.	.	.	.	.	.	.	80	.	.	.	.	.	.		.	.	.	90	.	.	.	.	.	.	.	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.			.	170	.	.	.	.	.	.	.	.	.	180			.
Predicted Secondary structure																																																																	.	.													.	.
Query SS confidence																																																																	.	.													.	.
Query Sequence		V	F	N	K	G	I	D	E	F	Y	A	Q	C	E	K	V	G	V	D	S	V	L	V	A	D	V	P	V	E	E	S	A	P	F	R	Q	A	A	L	R	H	N	V	A	P	I	F	I	C	P	P	N	A	D	D	D	L	L	R	Q	I	A	S	.	.	Y	G	R	G	Y	T	Y	L	L	S	R	A	.	.	G
Query Conservation																																																																	.	.													.	.
Alig confidence			.	.	.	.	.	.	.	.								.												.																																			.	.													.	.
Template Conservation			.	.	.	.	.	.	.	.								.												.
Template Sequence		H	.	.	.	.	.	.	.	.	V	E	L	V	A	K	Y	.	S	D	I	L	Q	I	G	A	R	N	S	.	Q	N	F	E	L	L	K	E	V	G	K	V	E	N	P	V	L	L	K	R	G	M	G	N	T	I	Q	E	L	L	Y	S	A	E	Y	I	M	A	Q	G	N	E	N	V	I	L	C	E	R	G	I
Template Known Secondary structure		G	.	.	.	.	.	.	.	.								.		S						G	G	G	T	.	T									T	T	S	S	S								T	T															T	T	T											B
Template Predicted Secondary structure			.	.	.	.	.	.	.	.								.												.
Template SS confidence
		99									100	.	.	.	.	.	.		.	.	.	110	.	.	.	.	.	.	.		.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.							.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.			.	.
Predicted Secondary structure																																					.	.	.	.	.	.																																				.	.
Query SS confidence																																					.	.	.	.	.	.																																				.	.
Query Sequence		V	T	G	A	E	N	R	A	A	L	P	L	N	H	L	V	A	K	L	K	E	Y	N	A	A	P	P	L	Q	G	F	G	I	S	A	.	.	.	.	.	.	P	D	Q	V	K	A	A	I	D	A	G	A	A	G	A	I	S	G	S	A	I	V	K	I	I	E	Q	H	I	N	E	P	E	K	M	.	.	L	A
Query Conservation																																					.	.	.	.	.	.																																				.	.
Alig confidence																																					.	.	.	.	.	.																						.	.													.	.
Template Conservation																																																																.	.
Template Sequence		R	T	F	E	T	A	T	R	F	T	L	D	I	S	A	V	P	V	V	K	E	L	S	H	L	P	I	I	V	D	P	S	H	P	A	G	R	R	S	L	V	I	P	L	A	K	A	A	Y	A	I	G	A	D	G	I	M	V	E	V	H	P	.	.	E	P	E	K	A	L	S	D	S	Q	Q	Q	L	T	F	D
Template Known Secondary structure				S			S	S	S	S	B			T	T									B	S	S						S	S	T	T	T		S	G	G	G											T	T		S						B		S	.	.	S	G	G	G		S	S		T	T	T		B
Template Predicted Secondary structure																																																																.	.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230			.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		254	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	K	V	F	V	Q	P	M	K	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	F	L	Q	L	L	K	E	L	E	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions