Job Description P0A877 Confidence 99.62% Date Thu Jan 5 11:07:06 GMT 2012 Rank 50 Aligned Residues 186 % Identity 17% Template c1yadD_ PDB info PDB header:transcription Chain: D: PDB Molecule:regulatory protein teni; PDBTitle: structure of teni from bacillus subtilis Resolution 2.10 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.		.	.	.	.	.	.	.	100
Predicted Secondary structure																																																																									.
Query SS confidence																																																																									.
Query Sequence		F	V	T	L	G	D	P	G	I	E	Q	S	L	K	I	I	D	T	L	I	E	A	G	A	D	A	L	E	L	G	I	P	F	S	D	P	L	A	D	G	P	T	I	Q	N	A	T	L	R	A	F	A	A	G	V	T	P	A	Q	C	F	E	M	L	A	L	I	R	Q	K	H	.	P	T	I	P	I	G	L	L
Query Conservation																																																																									.
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.								.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.
Template Sequence		H	A	I	T	D	D	S	K	P	V	E	E	L	A	R	I	I	I	T	I	Q	N	E	V	D	F	I	H	I	R	E	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	K	S	A	A	D	I	L	K	L	L	D	L	I	F	E	G	G	I	D	K	R	K	L	V	M	.
Template Known Secondary structure							S		S													G	G	G		S							T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S															T	T			G	G	G				.
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.																						.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure
Query SS confidence
Query Sequence		M	Y	A	N	L	V	F	N	K	G	I	D	E	F	Y	A	Q	C	E	K	V	G	V	D	S	V	L	V	A	D	V	P	V	E	E	S	A	P	F	R	Q	A	A	L	R	H	N	V	A	P	I	F	I	C	P	P	N	A	D	D	D	L	L	R	Q	I	A	S	Y	G	R	G	Y	T	Y	L	L	S	R	A
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.																																.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.																																.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	N	G	R	V	D	I	A	L	F	S	T	I	H	R	V	Q	L	P	S	G	S	F	S	P	.	.	.	.	.	K	Q	I	R	A	R	F	P	H	L	H	I	G	R	S	V	H	S	L	E	E	A	V	Q	A	E	K	E	D	A	D	.	.	.	Y	V	L	F	G	H
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.		S							T	T	T								T	T	S				.	.	.	.	.								T	T									S										T	T		S	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.																																.	.	.
Template SS confidence
													62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.						.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.				.	.	.	120	.	.
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	T	G	A	E	N	R	A	A	L	P	L	N	H	L	V	A	K	L	K	E	Y	N	A	A	P	P	L	Q	G	F	G	I	S	A	P	D	Q	V	K	A	A	I	D	A	G	A	A	G	A	I	S	G	S	A	I	V	K	I	I	E	Q	H	I	N	E	P	E	K	M	L	A	A	L	K	V	F	V	Q
Query Conservation
Alig confidence					.	.	.	.	.	.	.	.	.																							.																								.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.																							.																								.	.	.	.	.
Template Sequence		V	F	R	.	.	.	.	.	.	.	.	.	G	V	S	L	L	S	D	I	K	Q	R	I	S	I	P	V	I	A	I	G	G	M	.	T	P	D	R	L	R	D	V	K	Q	A	G	A	D	G	I	A	V	M	S	G	I	F	.	.	.	.	.	S	S	A	E	P	L	E	A	A	R	R	Y	S	R	K	L	K
Template Known Secondary structure					.	.	.	.	.	.	.	.	.														S						S	S		.		G	G	G							T	T		S					S					.	.	.	.	.	T	S	S	S
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.																							.																								.	.	.	.	.
Template SS confidence
		123	.	.										.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.		.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170						.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
		261	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	M	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	M	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		198	.	200

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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