|   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | Q | E | V | T | I | T | A | P | N | G | L | H | T | R | P | A | A | Q | F | V | K | E | A | K | G | F | T | S | E | I | T | V | T | S | N | G | K | S | A | S | A | K | S | L | F | K | L | Q | T | L | G | L | T | Q | G | T | V | V | T | I | S | A | E | G | E | D | E | Q | K | A | V | E | H | L | V | K | L | M | A |
Query Conservation |   |
  |   |   |
|   |
|   |   |   |   |
|
|
|
|
|
|
|
|   |
|
|   |   |
|   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |
|
|
|
|
|   |
|
|   |
|   |   |   |   |
|
|   |
|   |
|   |   |   |
|   |
|
|   |   |
|   |   |   |
|   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|
|
|   |   |   |   |
|
|
|
|
|
|
|
|   |
|   |   |   |
|   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |
|
| . |
|
|   |
|
|   |
|   |   |   |   |
|   |   |
|   |
|   |   |   |
|   |
|
|   |   |
|   |   |   |
|   |   |   |
|   |
Template Sequence |   |
Q | K | T | F | T | V | T | A | D | S | G | I | H | A | R | P | A | T | T | L | V | Q | A | A | S | K | F | D | S | D | I | N | L | E | F | N | G | K | T | V | N | L | K | . |
I | M | G | V | M | S | L | G | I | Q | K | G | A | T | I | T | I | S | A | E | G | S | D | E | A | D | A | L | A | A | L | E | D | T | M | S |
Template Known Secondary structure |   |
 |  |  |  |  | B |
|
| T | T |
| B |
|  |  |  |  |  |  |  |  |  |  |  |  | T | S | S | S |  |  |  |  |  |  | T | T |  |  |  |  |
|
| . |
|  |  |  |  |  | S |
| B |
| T | T |
|  |  |  |  |  |  |  | S | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |
|  |  | . |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | |
. | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
  |
  |   |
83 |
Predicted Secondary structure |   |
 |
Query SS confidence |   |
|
Query Sequence |   |
E |
Query Conservation |   |
  |
Alig confidence |   |
|
Template Conservation |   |
  |
Template Sequence |   |
K |
Template Known Secondary structure |   |
 |
Template Predicted Secondary structure |   |
 |
Template SS confidence |   |
|
  |   |
83 |
  |