Job Description P0AA04 Confidence 7.32% Date Thu Jan 5 11:11:42 GMT 2012 Rank 46 Aligned Residues 67 % Identity 7% Template c1ztgD_ PDB info PDB header:dna, rna binding protein/dna Chain: D: PDB Molecule:poly(rc)-binding protein 1; PDBTitle: human alpha polyc binding protein kh1 Resolution 3.00 Å

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		1	.	.	.	.	.	.	.	.	10	.	.			.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.
Query SS confidence														.	.
Query Sequence		M	F	Q	Q	E	V	T	I	T	A	P	N	.	.	G	L	H	T	R	P	A	A	Q	F	V	K	E	A	K	G	F	T	S	E	I	T	V	T	S	N	G	K	S	A	S	A	K	S	L	F	K	L	Q	T	L	G	L	T	Q	G	T	V	V	T	I	S	A	E	G	E	D	E	Q	K	A	V	E	H	L	V
Query Conservation														.	.
Alig confidence														.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	L	T	I	R	L	L	M	H	G	K	E	V	G	S	I	I	G	K	K	G	E	S	V	K	R	I	R	E	E	S	G	A	R	I	N	I	S	E	G	N	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	E	R	I	I	T	L	T	G	P	T	N	A	I	F	K	A	F	A	M	I	I
Template Known Secondary structure																		T		T	T	T																			S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.																	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		79	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	M	A	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	K	L	E	E
Template Known Secondary structure						T
Template Predicted Secondary structure
Template SS confidence
		77	.	.	80	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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