Job Description P76111 Confidence 3.34% Date Thu Jan 5 12:19:03 GMT 2012 Rank 13 Aligned Residues 89 % Identity 15% Template c3klzE_ PDB info PDB header:membrane protein Chain: E: PDB Molecule:putative formate transporter 1; PDBTitle: pentameric formate channel with formate bound Resolution 2.50 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.			.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.							.	.	.	.	.	70	.	.
Predicted Secondary structure																																		.	.																																	.	.	.	.	.	.
Query SS confidence																																		.	.																																	.	.	.	.	.	.
Query Sequence		M	N	Q	S	L	T	L	A	F	L	I	A	A	G	I	G	L	V	V	Q	N	T	L	M	V	R	I	T	Q	T	S	S	.	.	T	I	L	I	A	M	L	L	N	S	L	V	G	I	V	L	F	V	S	I	L	W	F	K	Q	G	M	A	G	F	G	E	.	.	.	.	.	.	L	V	S	S	V	R	W	W
Query Conservation																																		.	.																																	.	.	.	.	.	.
Alig confidence																																		.	.																																	.	.	.	.	.	.
Template Conservation
Template Sequence		K	A	A	Y	K	S	F	L	L	A	I	S	A	G	I	Q	I	G	I	A	F	V	F	Y	T	V	V	T	T	G	A	H	D	M	P	Y	G	V	T	K	L	L	G	G	L	A	F	S	L	G	L	I	L	V	V	I	T	G	G	E	L	F	T	S	S	V	L	I	L	V	A	K	A	S	G	K	I	S	W	K
Template Known Secondary structure																													T	T	T		T	T	S																								T				S	S												T	S	S
Template Predicted Secondary structure
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
										73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	T	L	I	P	G	L	L	G	S	F	F	V	F	A	S	I	S
Query Conservation		.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	L	V	R	N	W	T	V	V	Y	F	G	N	L	C	G	S	I	I	L	V	F	I	M	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions