Job Description P76111 Confidence 3.05% Date Thu Jan 5 12:19:03 GMT 2012 Rank 17 Aligned Residues 101 % Identity 21% Template c3c1iA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:ammonia channel; PDBTitle: substrate binding, deprotonation and selectivity at the2 periplasmic entrance of the e. coli ammonia channel amtb Resolution 2.30 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	N	Q	S	L	T	L	A	F	L	I	A	A	G	I	G	L	V	V	Q	N	T	L	M	V	R	I	T	Q	T	S	S	T	I	L	I	A	M	L	L	N	S	L	V	G	I	V	L	F	V	S	I	L	W	F	K	Q	G	M	A	G	F	G	E	L	V	S	S	V	R	W	W	T	L	I	P	G	L	L	G
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.																																																			.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.																																																			.	.	.	.	.
Template Sequence		I	G	V	G	G	A	L	I	I	G	V	V	A	G	L	A	G	.	.	.	.	.	.	.	.	L	W	G	V	T	M	D	D	P	C	D	V	F	G	V	H	G	V	C	G	I	V	G	C	I	M	T	G	I	F	A	A	S	S	L	G	G	V	G	F	A	E	G	V	T	M	G	H	Q	L	.	.	.	.	.
Template Known Secondary structure		S																	.	.	.	.	.	.	.	.									G	G	G																				T	S	G	G	G	T	S	S				T	T								.	.	.	.	.
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.																																																			.	.	.	.	.
Template SS confidence
		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.									.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	F	F	V	F	A	S	I	S	G	Y	Q	N	V	G	A	A	T	T	I	A	V	L	V	A	S	Q	L	I	G	G	L	M	L	D	I	F	R	S	H	G	V	P
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	L	V	Q	L	E	S	I	A	I	T	I	V	W	S	G	V	V	A	F	I	G	Y	K	L	A	D	L	T	V	G	L	R	V	P
Template Known Secondary structure		.	.	.	.	.	.	.	.	.																											T	T	T		S	B
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.
Template SS confidence
											353	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions