 |
Job Description | P0ADZ0 | Confidence | 10.97% | Date | Thu Jan 5 11:22:07 GMT 2012 |
Rank | 77 | Aligned Residues | 42 |
% Identity | 10% | Template | d1l3ka1 |
SCOP info | Ferredoxin-like
| RNA-binding domain, RBD
| Canonical RBD
|
Resolution | 1.10 |
|
  |   |
30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | V | L | K | V | A | K | D | A | T | K | A | E | I | K | A | A | V | Q | K | L | F | E | V | E | V | E | V | V | N | T | L | V | V | K | G | K | V | K | R | H | G |
Query Conservation |   |
|   |
|   |
|   |   |   |
|
|
|   |
|
|
|   |
|
|
|   |   |
|   |
|
|
|   |   |
|
|
|   |   |   |   |
|
|   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|
|
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
Template Sequence |   |
F | I | G | G | L | S | F | E | T | T | D | E | S | L | R | S | H | F | E | Q | W | G | T | L | T | D | C | V | V | M | R | D | P | N | T | K | R | S | R | G | F | G |
Template Known Secondary structure |   |
 |  |  | S |
|
| T | T |
|
|  |  |  |  |  |  |  |  | G | G | G | S |
|  |  |  |  |  |  |  |  |
| T | T | T |
|
|  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
17 | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|