Job Description P0ADZ0 Confidence 99.94% Date Thu Jan 5 11:22:07 GMT 2012 Rank 7 Aligned Residues 77 % Identity 40% Template c2zkrs_ PDB info PDB header:ribosomal protein/rna Chain: S: PDB Molecule:rna expansion segment es39 part ii; PDBTitle: structure of a mammalian ribosomal 60s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map Resolution 8.70 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	R	A	P	H	V	S	E	K	A	S	T	A	M	E	K	S	N	T	I	V	L	K	V	A	K	D	A	T	K	A	E	I	K	A	A	V	Q	K	L	F	E	V	E	V	E	V	V	N	T	L	V	V	K	G	K	V	K	R	H	G	Q	R	I	G	R	R	S	D	W	K	K	A	Y	V	T	L	K	E
Query Conservation
Alig confidence																																																											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	I	K	F	P	L	T	T	E	S	A	M	K	K	I	E	D	N	N	T	L	V	F	I	V	D	V	K	A	N	K	H	Q	I	K	Q	A	V	K	K	L	Y	D	I	D	V	A	K	V	N	T	L	I	R	P	D	G	.	.	.	.	.	.	.	.	.	.	.	.	.	E	K	K	A	Y	V	R	L	A	P
Template Known Secondary structure									S																			T	T																											S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.										T
Template Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.														.	.	.	.	.	.	.	140	.	.
		90	.	.		.	.	.	.	.	.	.
Predicted Secondary structure					.
Query SS confidence					.
Query Sequence		G	Q	N	.	L	D	F	V	G	G	A
Query Conservation					.
Alig confidence					.
Template Conservation
Template Sequence		D	Y	D	A	L	D	V	A	N	K	I
Template Known Secondary structure		T	S
Template Predicted Secondary structure
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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