Job Description P0ABT2 Confidence 100.00% Date Thu Jan 5 11:16:18 GMT 2012 Rank 6 Aligned Residues 156 % Identity 28% Template c2z90D_ PDB info PDB header:dna binding protein Chain: D: PDB Molecule:starvation-inducible dna-binding protein or fine PDBTitle: crystal structure of the second dps from mycobacterium2 smegmatis Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		12	.	.	.	.	.	.	.	20	.	.	.		.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		T	N	L	L	Y	T	R	N	D	V	S	D	.	S	E	K	K	A	T	V	E	L	L	N	R	Q	V	I	Q	F	I	D	L	S	L	I	T	K	Q	A	H	W	N	M	R	G	A	N	F	I	A	V	H	E	M	L	D	G	F	R	T	A	L	I	D	H	L	D	T	M	A	E	R	A	V	Q	L	G	G	V
Query Conservation														.
Alig confidence														.
Template Conservation
Template Sequence		M	S	A	R	R	T	E	S	D	I	Q	G	F	H	A	T	P	E	F	G	G	N	L	Q	K	V	L	V	D	L	I	E	L	S	L	Q	G	K	Q	A	H	W	N	V	V	G	S	N	F	R	D	L	H	L	Q	L	D	E	L	V	D	F	A	R	E	G	S	D	T	I	A	E	R	M	R	A	L	D	A	V
Template Known Secondary structure				S					S																																						S	T	T																													T	T
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.			.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.	.
Query SS confidence																																																	.	.
Query Sequence		A	L	G	T	T	Q	V	I	N	S	K	T	P	L	K	S	Y	P	L	D	I	H	N	V	Q	D	H	L	K	E	L	A	D	R	Y	A	I	V	A	N	D	V	R	K	A	I	G	.	.	E	A	K	D	D	D	T	A	D	I	L	T	A	A	S	R	D	L	D	K	F	L	W	F	I	E	S	N	I	E
Query Conservation																																																	.	.
Alig confidence																																																	.	.
Template Conservation
Template Sequence		P	D	G	R	S	D	T	V	A	A	T	T	T	L	P	E	F	P	A	F	E	R	S	T	A	D	V	V	D	L	I	T	T	R	I	N	A	T	V	D	T	I	R	R	V	H	D	A	V	D	A	E	D	P	S	T	A	D	L	L	H	G	L	I	D	G	L	E	K	Q	A	W	L	I	R	S	E	N	R
Template Known Secondary structure															S						S																																																								G	G	G
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions