Job Description P0ABX8 Confidence 19.71% Date Thu Jan 5 11:16:40 GMT 2012 Rank 5 Aligned Residues 81 % Identity 19% Template c3u5gB_ PDB info PDB header:ribosome Chain: B: PDB Molecule:40s ribosomal protein s1-a; PDBTitle: the structure of the eukaryotic ribosome at 3.0 a resolution Resolution 3.00 Å

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		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.										.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.
Query Sequence		F	T	V	N	L	G	D	A	D	R	V	L	Y	I	G	I	T	L	R	L	K	D	E	.	.	.	.	.	.	.	.	.	A	T	R	S	R	L	S	E	Y	L	P	E	V	R	S	R	L	L	L	L	F	S	R	Q	D	A	A	V	L	A	T	E	E	G	K	K	N	L	I	A	E	I	K	T	T	L	S	T
Query Conservation																									.	.	.	.	.	.	.	.	.
Alig confidence										.															.	.	.	.	.	.	.	.	.
Template Conservation										.
Template Sequence		V	T	V	K	T	S	D	D	.	Y	V	L	R	I	F	A	I	A	F	T	R	K	Q	A	N	Q	V	K	R	H	S	Y	A	Q	S	S	H	I	R	A	I	R	K	V	I	S	E	I	L	T	K	E	V	Q	G	S	T	L	A	Q	L	T	S	K	L	I	P	E	V	I	N	K	E	I	E	N	A	T	K	D
Template Known Secondary structure							S	S	S	.															T	T			S	S																										S	S										T	T	T											T	T
Template Predicted Secondary structure										.
Template SS confidence
		125	.	.	.	.	130	.	.		.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	V	A	G	Q	P	K	Q	D	V	T	D	V	L	Y	T	A
Query Conservation
Alig confidence					.	.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.
Template Sequence		I	F	P	.	.	.	.	.	.	.	L	Q	N	I	H	V	R	K
Template Known Secondary structure		T			.	.	.	.	.	.	.
Template Predicted Secondary structure					.	.	.	.	.	.	.
Template SS confidence
		204	.	.								.	.	.	210	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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