|   |
5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | |
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. | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
Predicted Secondary structure |   |
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|  |  |  |  |  |  |  |  | . | . | . |  |  |
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|  |  |  |  |
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|  |  |  |  |  |  |
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|  |  |  |  |  |  |
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|  |
Query SS confidence |   |
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| . |
. |
. |
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Query Sequence |   |
F | F | R | P | D | S | V | E | Q | A | L | E | L | K | . |
. |
. |
R | R | Y | Q | D | E | A | V | W | F | A | G | G | S | K | L | N | A | T | P | T | R | T | D | K | K | I | A | I | S | L | Q | D | L | E | L | D | W | V | D | W | D | N | G | A | L | R | I | G | A | M | S | R | L | Q | P | L | R | D | A | R | F | I |
Query Conservation |   |
|   |   |
|   |
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|   |
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|   |   |
|
| . | . | . |   |   |   |   |   |   |
|   |   |
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|   |   |   |   |   |   |   |   |   |   |   |   |
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|   |   |   |   |   |   |
|   |
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|   |   |   |   |   |
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Alig confidence |   |
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| . | . | . |
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| . |
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| . | . |
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| . | . | . | . |
Template Conservation |   |
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|   |
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|   |   |
|   |   |   |   |   |   |   |   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   | . |   |   |
|   |
|   |   |   |   | . | . |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|
|   |   |   |   |   |
|   |   | . | . | . | . |
Template Sequence |   |
Y | I | T | P | T | K | N | E | E | V | Q | A | V | V | K | Y | A | Y | Q | N | E | I | P | V | T | Y | L | G | N | G | S | N | I | I | I | R | E | G | G | I | . |
R | G | I | V | I | S | L | L | S | . |
. |
L | D | H | I | E | V | S | D | D | A | I | I | A | G | S | G | A | A | I | I | D | V | S | R | . |
. |
. |
. |
Template Known Secondary structure |   |
 |  |
|
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  | S | S |
| S | S |
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|
| T | T |
|  | . |  |  |  |  |  |  |
| T | T | . | . |
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|  |  |  |  | T | T |  |  |  |  |  | T | T | S | B |  |  |  |  |  |  | . | . | . | . |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |
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| . |
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|  |  |  |  |  |  | . | . | . | . |
Template SS confidence |   |
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  |   |
52 | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | |
. | . | . | . | . | . | . | . | 100 | |
|
. | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | |
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  |
  |   |
82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | |
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130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | |
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. | . | . | . | 150 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  | . | . |
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|  |  |  |  |  |  |  |  |
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| . | . | . | . | . | . | . |
|  |  |  |  |  |  |
Query SS confidence |   |
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| . |
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| . |
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Query Sequence |   |
P | A | A | L | R | E | A | L | G | F | V | Y | S | R | H | V | R | N | Q | S | T | I | G | G | E | I | A | A | R | Q | E | E | S | V | L | L | P | V | L | L | A | L | D | A | E | L | V | F | . |
. |
G | N | G | E | T | L | S | I | E | D | Y | L | A | C | P | C | . |
. |
. |
. |
. |
. |
. |
D | R | L | L | T | E | I |
Query Conservation |   |
  |   |   |
|   |   |
|   |   |   |
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|   |
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|   |
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|   |   |
|   |
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|   |   |   |   |
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|   |
|   |
|   |
| . | . |   |   |   |
|   |
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|   |   |   |   |   | . | . | . | . | . | . | . |   |
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|   |   |
|
Alig confidence |   |
. | . |
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| . | . |
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| . | . | . | . | . | . | . |
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Template Conservation |   |
. | . |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|   |   |   |   |
|   |
|   |   |
|   |   |   |   |
|   |
|   |   |   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |
|
|   |   |   |
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|   |
|   |   |   |   |   |   |
|
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|   |
|
Template Sequence |   |
. |
. |
V | A | R | D | Y | A | L | T | G | L | E | F | A | C | G | I | P | G | S | I | G | G | A | V | Y | M | N | A | G | A | Y | G | G | E | V | K | D | C | I | D | Y | A | L | C | V | N | E | Q | G | S | L | I | K | L | T | T | K | E | L | E | L | D | Y | R | N | S | I | I | Q | K | E | H | L | V | V | L | E | A |
Template Known Secondary structure |   |
. | . |  |  |  |  | T | T |
| B | S |
| G | G | G | T | T |
|
| S | B |  |  |  |  |  |  |  | T |
|  |  | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T | S |
|  |  |  |  |  | T | T | T | T | T |
| B | T | T | B |
|  |  |  |  | T | T |
|  |  |  |  |  |
Template Predicted Secondary structure |   |
. | . |  |  |  |  |
|
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|  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |
|  |  |  |  |
|
|  |  |  |  |
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|  |  |  |  |  |  |
Template SS confidence |   |
|
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  |   |
|
|
125 | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . |
  |
  |   |
153 | . |
Predicted Secondary structure |   |
 |  |
Query SS confidence |   |
|
|
Query Sequence |   |
I | I |
Query Conservation |   |
  |
|
Alig confidence |   |
|
|
Template Conservation |   |
  |   |
Template Sequence |   |
A | F |
Template Known Secondary structure |   |
 |  |
Template Predicted Secondary structure |   |
 |  |
Template SS confidence |   |
|
|
  |   |
203 | . |
  |