|   |
1 | . | |
|
. | |
. | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | |
|
. | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | |
. | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . |
Predicted Secondary structure |   |
|
| . | . |
| . |
|  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|  |  | . | . |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
| . |
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|  |  |  |
Query SS confidence |   |
|
| . |
. |
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | I | . |
. |
E | . |
Q | F | F | R | P | D | S | V | E | Q | A | L | E | L | K | R | R | Y | Q | D | E | A | V | W | F | A | G | G | S | K | L | . |
. |
N | A | T | P | T | R | T | D | K | K | I | A | I | S | L | Q | D | L | . |
E | L | D | W | V | D | W | D | N | G | A | L | R | I | G | A | M | S | R | L | Q | P |
Query Conservation |   |
|
| . | . |   | . |   |
|   |   |
|   |
|
|   |
|
|   |   |
|
|   |   |   |   |   |   |
|   |   |
|
|
|
|
|   |
| . | . |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |
| . |
|
|   |   |
|   |   |   |   |   |   |
|   |
|
|
|   |
|
|   |   |   |
Alig confidence |   |
|
| . | . |
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |
|   |
|   |   |
|   |
|
|   |
|
|   |   |
|
|   |   |   |   |   |   |
|   |   |
|
|
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |
|   |
|
|   |   |
|   |   |   |   |   |   |
|   |
|
|
|   |
|
|
|   |   |
Template Sequence |   |
M | I | P | P | R | F | E | Y | H | A | P | K | S | V | G | E | A | V | A | L | L | G | Q | L | G | S | D | A | K | L | L | A | G | G | H | S | L | L | P | M | M | K | L | R | F | A | Q | P | E | H | L | I | D | I | N | R | I | P | E | L | R | G | I | R | E | E | G | S | T | V | V | I | G | A | M | T | V | E | N | D |
Template Known Secondary structure |   |
|
|
|
|
|
|  |  |  |
|
| S | S |  |  |  |  |  |  |  |  |  |  |  | G | G | G |  |  |  |  | S | S |
| T | T |  |  |  |  |  |  | T | T | S |
|
|
| S |  |  |  |  |
| T | T |
| G | G | G |
|
|  |  |  |  | T | T |  |  |  |  |  | T | T |
| B |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
  |
  |   |
75 | . | . | . | . | 80 | . | . | |
|
|
. | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | |
|
|
130 | . | . | . | . | . | . | . | . | . | 140 | . | |
|
|
|
|
|
. |
Predicted Secondary structure |   |
 |  |  |
|
|
|  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  | . | . | . |
|
|
|
|  |  |  |  |  |  |  |  | . | . | . | . | . | . |
|
Query SS confidence |   |
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
Query Sequence |   |
L | R | D | A | R | F | I | P | . |
. |
. |
A | A | L | R | E | A | L | G | F | V | Y | S | R | H | V | R | N | Q | S | T | I | G | G | E | I | A | A | R | Q | E | E | S | V | L | L | P | V | L | L | A | L | D | A | E | L | V | F | . |
. |
. |
G | N | G | E | T | L | S | I | E | D | Y | L | . |
. |
. |
. |
. |
. |
A |
Query Conservation |   |
|   |   |   |   |   |
|   | . | . | . |   |   |
|   |   |
|   |   |   |
|
|
|   |
|
|
|
|   |
|
|
|
|
|
|
|   |   |
|   |
|   |   |
|   |   |   |   |
|
|
|
|   |
|   |
|   |
| . | . | . |   |   |   |
|   |
|
|   |   |
|
|   | . | . | . | . | . | . |   |
Alig confidence |   |
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
Template Conservation |   |
|   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |
|
|
|   |
|
|
|
|   |
|
|
|
|
|
|
|   |   |
|   |
|   |
|
|   |   |   |   |
|
|
|
|   |
|   |
|   |
|   |   |   |   |
|   |
|   |
|
|
|   |
|
|   |   |
|   |   |   |
|   |
Template Sequence |   |
L | I | S | S | P | I | V | Q | A | R | L | P | L | L | A | E | A | A | K | L | I | A | D | P | Q | V | R | N | R | G | T | I | G | G | D | I | A | H | G | D | P | G | N | D | H | P | A | L | S | I | A | V | E | A | H | F | V | L | E | G | P | N | G | R | R | T | V | P | A | D | G | F | F | L | G | T | Y | M | T | L |
Template Known Secondary structure |   |
 |  |  |
|  |  |  |  |  |  |
|  |  |  |  |  |  | G | G | G | S | S |
| T | T | G | G | G | T |
| B |  |  |  |  |  |  | T |
|
| T | T |
| S |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  | T | T |  |  |  |  |  |  | S | T | T | T |  |  |  | T | T |  |  | S |
Template Predicted Secondary structure |   |
 |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
81 | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 |
  |
  |   |
143 | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
C | P | C | D | R | L | L | T | E | I | I | I | K | D | P | Y | R |
Query Conservation |   |
  |   |   |   |
|
|
|   |   |
|   |
|
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|
|
|   |   |
|   |
|
|   |   |   |   |
Template Sequence |   |
L | E | E | N | E | V | M | V | E | I | R | V | P | A | F | A | Q |
Template Known Secondary structure |   |
|
| T | T |
|  |  |  |  |  |  |  |  |
|
|
|
|
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
161 | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . |
  |