Job Description P64557 Confidence 97.70% Date Thu Jan 5 12:09:25 GMT 2012 Rank 25 Aligned Residues 155 % Identity 20% Template c3fwaA_ PDB info PDB header:flavoprotein Chain: A: PDB Molecule:reticuline oxidase; PDBTitle: structure of berberine bridge enzyme, c166a variant in complex with2 (s)-reticuline Resolution 1.50 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.				20	.	.	.	.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.																.																			.
Query SS confidence																	.	.	.																.																			.
Query Sequence		F	F	R	P	D	S	V	E	Q	A	L	E	L	K	R	.	.	.	R	Y	Q	D	E	A	V	W	F	A	G	G	S	K	L	.	N	A	T	P	T	R	T	D	K	K	I	A	I	S	L	Q	D	L	.	E	L	D	W	V	D	W	D	N	G	A	L	R	I	G	A	M	S	R	L	Q	P	L	R	D	A	R
Query Conservation																	.	.	.																.																			.
Alig confidence																	.	.	.																.																			.			.																							.	.
Template Conservation																																																									.																							.	.
Template Sequence		I	I	L	P	G	S	K	E	E	L	S	N	T	I	R	C	I	R	K	G	S	W	T	I	R	L	R	S	G	G	H	S	Y	E	G	L	S	Y	T	S	D	T	P	F	I	L	I	D	L	M	N	L	N	R	V	.	S	I	D	L	E	S	E	T	A	W	V	E	S	G	S	T	L	G	E	L	Y	Y	.	.
Template Known Secondary structure							S													T	T	T							S	S				T	T		T	T	S			S	S								T	T					.				T	T	T	T						T	T		B							.	.
Template Predicted Secondary structure																																																									.																							.	.
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		80	.	.	.	.	.	.	.	.		.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.					130	.	.	.	.	.	.	.	.	.							140	.	.	.	.	.	.	.
Predicted Secondary structure											.																																										.	.	.	.											.	.	.	.	.	.									.
Query SS confidence											.																																										.	.	.	.											.	.	.	.	.	.									.
Query Sequence		F	I	P	A	A	L	R	E	A	.	L	G	F	V	Y	S	R	H	V	R	N	Q	S	T	I	G	G	E	I	A	A	R	Q	E	E	S	V	L	L	P	V	L	L	A	L	D	A	E	L	V	F	.	.	.	.	G	N	G	E	T	L	S	I	E	D	.	.	.	.	.	.	Y	L	A	C	P	C	D	R	.
Query Conservation											.																																										.	.	.	.											.	.	.	.	.	.									.
Alig confidence		.	.	.	.						.																																										.	.	.	.											.	.	.	.	.	.									.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	A	I	T	E	S	S	S	K	L	G	F	T	A	G	W	A	P	T	V	G	T	G	G	H	I	S	G	G	G	F	G	M	M	S	R	K	Y	G	L	A	A	D	N	V	V	D	A	I	L	I	D	A	N	G	A	I	L	D	R	Q	A	M	G	E	D	V	F	W	A	I	R	G	G	G	G	G
Template Known Secondary structure		.	.	.	.							S	S							S		T	T	S	B							T					T	T							G	G	G	G									T	T																		T	T	S		T	T
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
					148	.	150	.	.	.	.				.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure		.	.	.								.	.	.
Query SS confidence		.	.	.								.	.	.
Query Sequence		.	.	.	L	L	T	E	I	I	I	.	.	.	K	D	P	Y	R	T	C	A	T	R	K	I
Query Conservation		.	.	.								.	.	.
Alig confidence		.	.	.								.	.	.
Template Conservation
Template Sequence		V	W	G	A	I	Y	A	W	K	I	K	L	L	P	V	P	E	K	V	T	V	F	R	V	T
Template Known Secondary structure		S	S															S
Template Predicted Secondary structure
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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