|   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | |
|
. | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | |
. | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | |
. | . |
Predicted Secondary structure |   |
|  |  |
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|
|  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |
|
|  |  | . | . |  |  |  |
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|  |  |  |  |
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| . |
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|  |  |  |  |
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|  |  |  |  |  |  |
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|  |  |  |  |  |  | . |
|
|
Query SS confidence |   |
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| . |
. |
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| . |
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| . |
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|
Query Sequence |   |
Q | F | F | R | P | D | S | V | E | Q | A | L | E | L | K | R | R | Y | Q | D | E | A | V | W | F | A | G | G | S | K | L | . |
. |
N | A | T | P | T | R | T | D | K | K | I | A | I | S | L | Q | D | L | . |
E | L | D | W | V | D | W | D | N | G | A | L | R | I | G | A | M | S | R | L | Q | P | L | R | D | . |
A | R |
Query Conservation |   |
  |
|   |   |
|   |
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|   |
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|
|   |   |   |   |   |   |
|   |   |
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|   |
| . | . |   |   |   |   |   |   |   |   |   |   |   |   |
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|   |   |
| . |
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|   |   |   |   |   |   |
|   |
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|   |
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|   |   |   |
|   |   | . |   |   |
Alig confidence |   |
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| . |
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| . | . |
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| . |
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| . |
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Template Conservation |   |
|   |   |   |
|   |
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|   |
|
|   |   |
|
|   |   |   | . |
|   |
|   |
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|   |
|   |   |   |   |   |   |   |   |   |   |   |
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|   |   |
|   |
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|   |   |
|   |   |   |   |   |   |
|   |
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|   |
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|   |   |
|   |   |   |   |   |
Template Sequence |   |
P | A | F | L | P | E | T | S | D | A | L | A | D | W | Y | L | A | H | . |
P | E | A | T | L | I | A | G | G | T | D | V | S | L | W | V | T | K | A | L | R | D | L | P | E | V | A | F | L | S | H | C | K | D | L | A | Q | I | R | E | T | P | D | G | Y | G | I | G | A | G | V | T | I | A | A | L | R | A | F | A | E |
Template Known Secondary structure |   |
|
| B |
|
| S | S |  |  |  |  |  |  |  |  |  |  |
| . | T | T |
|  |  |  | S | S |
| T | T |  |  |  |  |  |  | T | S |
|
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|
| S |  |  |  |
| T | T |
| T | T | T | S |
|  |  |  |  | T | T |  |  |  |  |  | T | T |
| B |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
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|
|  |  |  |  |  |  |  |  |  |  |
| . |
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|  |  |  |  |
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|  |  |  |  |
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|  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
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  |   |
179 | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | |
. | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . |
  |
  |   |
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | |
|
|
130 | . | . | . | . | . | . | . | . | . | 140 | . | |
|
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|
. | . | . | . | . | . | . | . | 150 |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  | . | . | . |
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|  |  |  |  |  |  |  |  | . | . | . | . | . | . |
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|  |  |  |  |
Query SS confidence |   |
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| . |
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. |
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| . |
. |
. |
. |
. |
. |
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Query Sequence |   |
F | I | P | A | A | L | R | E | A | L | G | F | V | Y | S | R | H | V | R | N | Q | S | T | I | G | G | E | I | A | A | R | Q | E | E | S | V | L | L | P | V | L | L | A | L | D | A | E | L | V | F | . |
. |
. |
G | N | G | E | T | L | S | I | E | D | Y | L | . |
. |
. |
. |
. |
. |
A | C | P | C | D | R | L | L | T |
Query Conservation |   |
  |
|   |   |   |
|   |   |
|   |   |   |
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|   |
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|   |
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|   |   |
|   |
|   |   |
|   |   |   |   |
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|   |
|   |
|   |
| . | . | . |   |   |   |
|   |
|
|   |   |
|
|   | . | . | . | . | . | . |   |   |   |   |   |
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|   |
Alig confidence |   |
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| . | . | . |
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| . | . | . | . | . | . |
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|
|
Template Conservation |   |
  |   |   |
|   |
|   |   |   |   |   |   |
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|
|   |
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|   |
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|   |   |
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|   |
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|   |
|   |
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|   |
|   |
|   |
|   |   |
|   |
|   |
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|   |
|
|   |   |
|   |   |
|
|   |
|   |   |   |
|
|
|   |
Template Sequence |   |
G | P | H | P | A | L | A | G | L | L | R | R | F | A | S | E | Q | V | R | Q | V | A | T | I | G | G | N | I | A | N | G | S | P | I | G | D | G | P | P | A | L | I | A | M | G | A | S | L | T | L | R | R | G | Q | E | R | R | R | M | P | L | E | D | F | F | L | E | Y | R | K | Q | D | R | R | P | G | E | F | V | E |
Template Known Secondary structure |   |
T | T |
|  |  |  |  |  |  | T | T | S | S | S |
|  |  |  |  | T | T |
| B |  |  |  |  |  |  | T | T |
| T | T |
| S |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  | T | T |  |  |  |  |  |  | G | G | G | G |  |  |  | T | T |  |  | S |
|
| T | T |  |  |  |  |
Template Predicted Secondary structure |   |
 |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|  |  |
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|  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |
|
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|  |  |  |
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|  |  |  |
Template SS confidence |   |
|
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  |   |
258 | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . |
  |
  |   |
151 | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | |
. | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | |
|
|
|
. | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | |
|
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|
. | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
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|
|  |  |  |  |  |  |
| . |
|
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|  |  |  |  |  |  |  |  |  |  |  |
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| . | . | . | . |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |
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|
|  |  | . | . | . | . | . | . | . |  |  |
Query SS confidence |   |
|
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| . |
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| . |
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. |
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| . |
. |
. |
. |
. |
. |
. |
|
|
Query Sequence |   |
E | I | I | I | K | D | P | Y | R | T | C | A | T | R | K | I | S | . |
R | S | Q | A | G | L | T | V | V | T | A | A | V | A | M | T | D | H | D | G | . |
. |
. |
. |
M | R | I | A | L | D | G | V | A | S | K | A | L | R | L | H | D | V | E | K | Q | N | L | E | G | N | A | L | E | . |
. |
. |
. |
. |
. |
. |
Q | A |
Query Conservation |   |
  |
|   |
|
|   |   |   |   |   |   |   |   |   |
|   |   | . |
|   |   |   |   |   |
|   |
|   |   |
|   |   |   |   |   |   |   |   | . | . | . | . |   |
|
|
|   |
|
|   |   |   |   |
|   |
|   |   |   |   |
|   |   |
|   |   |   |   |   |   |   | . | . | . | . | . | . | . |   |   |
Alig confidence |   |
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| . |
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| . | . | . | . |
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| . | . | . | . | . | . | . |
|
|
Template Conservation |   |
|
|   |
|
|   |   |   |   |   |   |   |   |
|
|   |   |   |
|   |   |   |
|
|
|
|
|   |   |
|   |   |
|   |   |   |   |   |   |
|   |   |   |
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|   |
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|   |   |
|   |
|
|   |   |   |
|   |   |
|   |
|
|   |
|   |   |   |   |
|   |   |
|   |   |   |
Template Sequence |   |
S | V | T | L | P | K | S | A | P | G | L | R | C | Y | K | L | S | K | R | F | D | Q | D | I | S | A | V | C | G | C | L | N | L | T | L | K | G | S | K | I | E | T | A | R | I | A | F | G | G | M | A | G | V | P | K | R | A | A | A | F | E | A | A | L | I | G | Q | D | F | R | E | D | T | I | A | A | A | L | P | L |
Template Known Secondary structure |   |
 |  |  |  |
| S |
|
| T | T |  |  |  |  |  |  |
| S | S | S | S | S |
|
|
| S |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  | S | S | S | S | S |
|  |  |
|  |  |  |  |  | T | T | T | T |
| B |
|
|  |  |  |  |  |  |  | G | G | G |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
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|  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
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  |   |
338 | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . |
  |
  |   |
219 | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
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|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
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|
Query SS confidence |   |
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Query Sequence |   |
V | A | N | A | I | F | P | Q | E | D | L | R | G | S | V | A | Y | K | R | Y | I | T | G | V | L | V | A | D | L | Y | A | D | C | Q | Q | A | G | E | E | A | V |
Query Conservation |   |
  |   |   |   |   |   |
|   |   |
|   |
|   |
|   |   |
|
|   |   |
|   |   |   |
|   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |
|
Alig confidence |   |
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Template Conservation |   |
|   |   |
|
|   |
|   |
|
|   |
|
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|
|   |
|
|   |   |
|   |   |
|   |   |   |
|
|   |   |
|
|   |   |   |   |
Template Sequence |   |
L | A | Q | D | F | T | P | L | S | D | M | R | A | S | A | A | Y | R | M | N | A | A | Q | A | M | A | L | R | Y | V | R | E | L | S | G | E | A | V | A | V | L |
Template Known Secondary structure |   |
 |  |  |  |
|
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| B | T | T | B |
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| S | T |
Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
418 | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . |
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