 |
Job Description | P64557 | Confidence | 9.39% | Date | Thu Jan 5 12:09:25 GMT 2012 |
Rank | 65 | Aligned Residues | 57 |
% Identity | 12% | Template | c2e1aD_ |
PDB info |
PDB header:transcription | Chain: D: PDB Molecule:75aa long hypothetical regulatory protein asnc; |
PDBTitle: crystal structure of ffrp-dm1
|
Resolution | 2.50 Å |
|
 |
  |   |
7 | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | |
|
|
. | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | |
|
50 | . | . | |
. | . | . | . | . | . | . | 60 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . | . |
|  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
| . | . |
|
|
| . |
|
|
|
|  |  |  |  |
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | P | D | S | V | E | Q | A | L | E | L | K | R | R | Y | Q | D | E | . |
. |
. |
A | V | W | F | A | G | G | S | K | L | N | A | T | P | T | R | T | D | K | K | I | A | I | S | L | . |
. |
Q | D | L | . |
E | L | D | W | V | D | W | D | N | G | A | L |
Query Conservation |   |
  |
|   |
|
|   |
|
|   |   |
|
|   |   |   |   |   |   | . | . | . |
|   |   |
|
|
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|
| . | . |   |   |
| . |
|
|   |   |
|   |   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |
|   |   |   |
|   |   |   | . |
|
|
|   |   |   |   |   |
|
|
|   |   |
|   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |
|
|   |   |   |   |
|   |
|
Template Sequence |   |
A | A | G | K | E | R | E | V | M | E | K | L | L | A | M | . |
P | E | V | K | E | A | Y | V | V | Y | G | E | Y | D | L | I | V | K | V | E | T | D | T | L | K | D | L | D | Q | F | I | T | E | K | I | R | K | M | P | E | I | Q | M | T | S | T | M | I |
Template Known Secondary structure |   |
| T | T |
|  |  |  |  |  |  |  |  |  | T | S | . | T | T |  |  |  |  |  |  |
| S | S | S |
| S |  |  |  |  |  |  |  | S | S |  |  |  |  |  |  |  |  |  |  | T | G | G | G |
| T | T |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
| . |
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
11 | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | |
. | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|