Job Description P64557 Confidence 100.00% Date Thu Jan 5 12:09:25 GMT 2012 Rank 9 Aligned Residues 250 % Identity 22% Template c1rm6E_ PDB info PDB header:oxidoreductase Chain: E: PDB Molecule:4-hydroxybenzoyl-coa reductase beta subunit; PDBTitle: structure of 4-hydroxybenzoyl-coa reductase from thauera2 aromatica Resolution 1.60 Å

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		1	.	.		.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.			.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure					.																																.	.																			.												.
Query SS confidence					.																																.	.																			.												.
Query Sequence		M	I	E	.	Q	F	F	R	P	D	S	V	E	Q	A	L	E	L	K	R	R	Y	Q	D	E	A	V	W	F	A	G	G	S	K	L	.	.	N	A	T	P	T	R	T	D	K	K	I	A	I	S	L	Q	D	L	.	E	L	D	W	V	D	W	D	N	G	A	.	L	R	I	G	A	M	S	R	L	Q	P	L
Query Conservation					.																																.	.																			.												.
Alig confidence					.																		.	.													.	.																			.												.
Template Conservation																							.	.
Template Sequence		L	T	D	F	R	T	H	R	P	A	T	L	A	D	A	V	N	A	L	A	A	.	.	E	A	T	L	P	L	G	A	G	T	D	L	L	P	N	L	R	R	G	L	G	H	P	A	A	L	V	D	L	T	G	I	D	G	L	A	T	I	S	T	L	A	D	G	S	L	R	I	G	A	G	A	T	L	E	A	I
Template Known Secondary structure											S	S								T	T	S	.	.	T	T					S	S		T	T							T	T					S						T	T		T	T	T	T						T	T	S						T	T		B
Template Predicted Secondary structure																							.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.			.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		76	.	.	.	80	.	.				.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.																																							.	.	110	.	.	.	.
Predicted Secondary structure									.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	D	A	R	F	I	P	.	.	.	A	A	L	R	E	A	L	G	F	V	Y	S	R	H	V	R	N	Q	S	T	I	G	G	E	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	R	Q	E	E	S
Query Conservation									.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	E	H	D	A	I	R	T	T	W	P	A	L	A	Q	A	A	E	S	V	A	G	P	T	H	R	A	A	A	T	L	G	G	N	L	C	Q	D	T	R	C	T	F	Y	N	Q	S	E	W	W	R	S	G	N	G	Y	C	L	K	Y	K	G	D	K	C	H	V	I	V	K	S	D	R	C	Y	A	T	Y	H	G
Template Known Secondary structure																					S	S						T	T		B						T				B		T	T	T	S	S								T	T		B	T	T	B	B		S			S	S	S	T	T		S	S				B
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.				130	.	.	.	.	.	.	.	.	.	140	.									.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.			.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure																	.	.	.													.	.	.	.	.	.	.	.																					.	.
Query SS confidence																	.	.	.													.	.	.	.	.	.	.	.																					.	.
Query Sequence		V	L	L	P	V	L	L	A	L	D	A	E	L	V	F	.	.	.	G	N	G	E	T	L	S	I	E	D	Y	L	.	.	.	.	.	.	.	.	A	C	P	C	D	R	L	L	T	E	I	I	I	K	D	P	Y	R	T	C	.	.	A	T	R	K	I	S	R	S	Q	A	G	L	T	V	V	T	A	A	V	A
Query Conservation																	.	.	.													.	.	.	.	.	.	.	.																					.	.
Alig confidence																	.	.	.													.	.	.	.	.	.	.	.																					.	.
Template Conservation
Template Sequence		D	V	A	P	A	L	M	V	L	D	A	R	A	E	I	V	G	P	A	G	K	R	T	V	P	V	A	Q	L	F	R	E	S	G	A	E	H	L	T	L	E	K	G	E	L	L	A	A	I	E	V	P	P	T	G	A	W	S	A	A	Y	S	K	V	R	I	R	D	A	V	D	F	P	L	A	G	V	A	A	A
Template Known Secondary structure		S								T	T								T	T							G	G	G	G	B		S		T	T	S		B				T	T												T	T										S	S	S	S	S				S
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		182	.	.	.	.	.					.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.								.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure								.	.	.	.																														.	.	.	.	.	.	.
Query SS confidence								.	.	.	.																														.	.	.	.	.	.	.
Query Sequence		M	T	D	H	D	G	.	.	.	.	M	R	I	A	L	D	G	V	A	S	K	A	L	R	L	H	D	V	E	K	Q	N	L	E	G	N	A	L	E	.	.	.	.	.	.	.	Q	A	V	A	N	A	I	F	P	Q	E	D	L	R	G	S	V	A	Y	K	R	Y	I	T	G	V	L	V	A	D	L	Y	A	D
Query Conservation								.	.	.	.																														.	.	.	.	.	.	.
Alig confidence								.	.	.	.																.	.													.	.	.	.	.	.	.
Template Conservation																											.	.
Template Sequence		L	Q	R	D	G	D	R	I	A	G	L	R	V	A	I	T	G	S	N	S	A	P	L	M	V	.	.	P	V	D	A	L	L	G	G	N	W	D	D	A	A	A	E	T	L	A	Q	L	V	R	K	T	S	N	V	L	R	T	T	I	T	G	V	K	Y	R	R	R	V	L	L	A	I	S	R	K	V	V	D	Q
Template Known Secondary structure						T	T											S	S	S	S	S					.	.			G	G	G	T	T	S			S																			T	T	S	S	S
Template Predicted Secondary structure																											.	.
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.			.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
		251	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	Q	Q	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	W	E	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		320	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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