Job Description P64557 Confidence 100.00% Date Thu Jan 5 12:09:25 GMT 2012 Rank 2 Aligned Residues 254 % Identity 24% Template c1n62C_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:carbon monoxide dehydrogenase medium chain; PDBTitle: crystal structure of the mo,cu-co dehydrogenase (codh), n-2 butylisocyanide-bound state Resolution 1.09 Å

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		1	.			.		.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.			.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure				.	.		.																																.	.																			.
Query SS confidence				.	.		.																																.	.																			.
Query Sequence		M	I	.	.	E	.	Q	F	F	R	P	D	S	V	E	Q	A	L	E	L	K	R	R	Y	Q	D	E	A	V	W	F	A	G	G	S	K	L	.	.	N	A	T	P	T	R	T	D	K	K	I	A	I	S	L	Q	D	L	.	E	L	D	W	V	D	W	D	N	G	A	L	R	I	G	A	M	S	R	L	Q	P
Query Conservation				.	.		.																																.	.																			.
Alig confidence				.	.		.																																.	.																			.
Template Conservation
Template Sequence		M	I	P	G	S	F	D	Y	H	R	P	K	S	I	A	D	A	V	A	L	L	T	K	L	G	E	D	A	R	P	L	A	G	G	H	S	L	I	P	I	M	K	T	R	L	A	T	P	E	H	L	V	D	L	R	D	I	G	D	L	V	G	I	R	E	E	G	T	D	V	V	I	G	A	M	T	T	Q	H	A
Template Known Secondary structure													S	S												G	G	G					S	S		T	T							T	T	S				S						T	T		G	G	G	S						T	T						T	T		B
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		75	.	.	.	.	80	.	.				.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.				130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure										.	.	.																																																.	.	.																	.	.	.
Query SS confidence										.	.	.																																																.	.	.																	.	.	.
Query Sequence		L	R	D	A	R	F	I	P	.	.	.	A	A	L	R	E	A	L	G	F	V	Y	S	R	H	V	R	N	Q	S	T	I	G	G	E	I	A	A	R	Q	E	E	S	V	L	L	P	V	L	L	A	L	D	A	E	L	V	F	.	.	.	G	N	G	E	T	L	S	I	E	D	Y	L	A	C	P	C	.	.	.
Query Conservation										.	.	.																																																.	.	.																	.	.	.
Alig confidence										.	.	.																																																.	.	.																	.	.	.
Template Conservation
Template Sequence		L	I	G	S	D	F	L	A	A	K	L	P	I	I	R	E	T	S	L	L	I	A	D	P	Q	I	R	Y	M	G	T	I	G	G	N	A	A	N	G	D	P	G	N	D	M	P	A	L	M	Q	C	L	G	A	A	Y	E	L	T	G	P	E	G	A	R	I	V	A	A	R	D	Y	Y	Q	G	A	Y	F	T	A
Template Known Secondary structure																				T	T	S	S									B							S			T	T		S									T								T	T														T	T			S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
					146	.	.	.	150	.	.	.	.	.	.	.			.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.					.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure		.	.	.													.	.																															.	.	.	.
Query SS confidence		.	.	.													.	.																															.	.	.	.
Query Sequence		.	.	.	D	R	L	L	T	E	I	I	I	K	D	P	.	.	Y	R	T	C	A	T	R	K	I	S	R	S	Q	A	G	L	T	V	V	T	A	A	V	A	M	T	D	H	D	G	.	.	.	.	M	R	I	A	L	D	G	V	A	S	K	A	L	R	L	H	D	V	E	K	Q	N	L	E	G	N	A	L	E
Query Conservation		.	.	.													.	.																															.	.	.	.
Alig confidence		.	.	.													.	.																															.	.	.	.
Template Conservation
Template Sequence		I	E	P	G	E	L	L	T	A	I	R	I	P	V	P	P	T	G	H	G	Y	A	Y	E	K	L	K	R	K	I	G	D	Y	A	T	A	A	A	A	V	V	L	T	M	S	G	G	K	C	V	T	A	S	I	G	L	T	N	V	A	N	T	P	L	W	A	E	E	A	G	K	V	L	V	G	T	A	L	D	K
Template Known Secondary structure				T	T													T	T										S	S	T	T				S											T	T											S	S	S	S	S												T	T	S
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
									217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	Q	A	V	A	N	A	I	F	P	Q	E	D	L	R	G	S	V	A	Y	K	R	Y	I	T	G	V	L	V	A	D	L	Y	A	D	C	Q	Q	A
Query Conservation		.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	A	L	D	K	A	V	A	L	A	E	A	I	T	A	P	A	S	D	G	R	G	P	A	E	Y	R	T	K	M	A	G	V	M	L	R	R	A	V	E	R	A	K	A	R
Template Known Secondary structure																				B	T	T	B
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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