Job Description P0AD99 Confidence 4.71% Date Thu Jan 5 11:20:24 GMT 2012 Rank 13 Aligned Residues 202 % Identity 18% Template d1l7va_ SCOP info ABC transporter involved in vitamin B12 uptake, BtuC ABC transporter involved in vitamin B12 uptake, BtuC ABC transporter involved in vitamin B12 uptake, BtuC Resolution 3.20

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		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	L	L	T	R	Y	T	V	W	A	G	L	M	A	G	V	G	L	T	L	L	Y	L	A	L	F	R	L	G	S	D	S	A	S	L	V	D	Q	S	A	N	G	A	A	I	L	H	A	Y	V	Q	H	T	F	G	G	G	G	S	F	L	L	A	A	L	I	F	I	A	C	L	V	T	A	V	G	L	T	C
Query Conservation
Alig confidence																																																									.	.	.	.	.	.
Template Conservation																																																									.	.	.	.	.	.
Template Sequence		A	R	Q	Q	Q	R	Q	N	I	R	W	L	L	C	L	S	V	L	X	L	L	A	L	L	L	S	L	C	A	G	E	Q	W	I	S	P	G	D	W	F	T	P	R	G	E	L	F	V	W	Q	I	R	L	P	R	.	.	.	.	.	.	T	L	A	V	L	L	V	G	A	A	L	A	I	S	G	A	V	X	Q
Template Known Secondary structure																														B	S	S	S	B			S	G	G	G	S	S	T	T	T	T	T					T					.	.	.	.	.	.
Template Predicted Secondary structure																																																									.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.							60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		301	.	.	.		.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
Predicted Secondary structure						.
Query SS confidence						.
Query Sequence		A	C	A	E	.	F	F	A	Q	Y	V	P	L	S	Y	R	T	L	V	F	I	L	G	G	F	S	M	V	V	S	N	L	G	L	S	Q	L	I	Q	I	S	V	P	V	L	T	A	I	Y	P	P	C	I	A	L	V	V	L	S	F	T	R	S	W	W	H	N	S	S	R	V	I	A	P	P	M	F	I	S	L
Query Conservation						.
Alig confidence						.																								.	.	.
Template Conservation																														.	.	.
Template Sequence		A	L	F	E	N	P	L	A	E	P	G	L	L	G	V	S	N	G	A	G	V	G	L	I	A	A	V	L	.	.	.	L	G	Q	G	Q	L	P	N	W	A	L	G	L	C	A	I	A	G	A	L	I	I	T	L	I	L	L	R	F	A	R	R	H	L	S	T	S	R	L	L	L	A	G	V	A	L	G	I	I
Template Known Secondary structure					T		T	T			T	T	T	T	T															.	.	.	T	S		T	T																												T
Template Predicted Secondary structure																														.	.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.				.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.						.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.
Predicted Secondary structure																																			.	.	.	.	.
Query SS confidence																																			.	.	.	.	.
Query Sequence		L	F	G	I	L	D	G	I	K	A	S	A	F	S	D	I	L	P	S	W	A	Q	R	L	P	L	A	E	Q	G	L	A	W	.	.	.	.	.	L	M	P	T	V	V	M	V	V	L	A	I	I	W	D	R	A	A	G
Query Conservation																																			.	.	.	.	.
Alig confidence																																			.	.	.	.	.
Template Conservation
Template Sequence		C	S	A	L	X	T	W	A	I	Y	F	S	T	S	V	D	L	R	Q	L	X	Y	W	X	X	G	G	F	G	G	V	D	W	R	Q	S	W	L	X	L	A	L	I	P	V	L	L	W	I	C	C	Q	S	R	P	X	N
Template Known Secondary structure																										T				T	T			G	G	G
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions