Job Description P0AD99 Confidence 1.27% Date Thu Jan 5 11:20:24 GMT 2012 Rank 63 Aligned Residues 93 % Identity 15% Template c2bg9A_ PDB info PDB header:ion channel/receptor Chain: A: PDB Molecule:acetylcholine receptor protein, alpha chain; PDBTitle: refined structure of the nicotinic acetylcholine receptor2 at 4a resolution. Resolution 4.00 Å

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		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	A	I	Y	P	P	C	I	A	L	V	V	L	S	F	T	R	S	W	W	H	N	S	S	R	V	I	A	P	P	M	F	I	S	L	L	F	G	I	L	D	G	I	K	A	S	A	F	S	D	I	L	P	S	W	A	Q	R	L	P	L	A	E	Q	G	L	A	W	L	M	P	T	V	V	M	V	V	L	A
Query Conservation
Alig confidence																											.																			.	.
Template Conservation																											.																			.	.
Template Sequence		V	V	N	V	I	I	P	C	L	L	F	S	F	L	T	V	L	V	F	Y	L	P	T	D	S	.	G	E	K	M	T	L	S	I	S	V	L	L	S	L	T	V	F	L	.	.	L	V	I	V	E	L	I	P	S	T	S	S	A	V	P	L	I	G	K	Y	M	L	F	T	M	I	F	V	I	S	S	I	I	V
Template Known Secondary structure																											.	G	G	G																.	.														S				G	G	G
Template Predicted Secondary structure																											.																			.	.
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.			.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
		424	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	I	W	D	R	A	A	G	R	Q	V	T	S	S	A	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	V	V	V	I	N	T	H	H	R	S	P	S	T	H	S
Template Known Secondary structure												S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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