Job Description Q46904 Confidence 99.36% Date Thu Jan 5 12:35:41 GMT 2012 Rank 95 Aligned Residues 314 % Identity 18% Template c3k7tB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:6-hydroxy-l-nicotine oxidase; PDBTitle: crystal structure of apo-form 6-hydroxy-l-nicotine oxidase,2 crystal form p3121 Resolution 2.85 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.															.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		C	D	I	I	I	I	G	A	G	I	A	G	T	A	C	A	L	R	C	A	R	A	G	L	S	V	L	L	L	E	R	A	E	I	P	G	S	K	N	L	S	G	G	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	Y	T	H	A	L	A	E	L	L	P	Q	F	H	L	T	A	P	L	E	R	R
Query Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	D	A	I	V	V	G	G	G	F	S	G	L	K	A	A	R	D	L	T	N	A	G	K	K	V	L	L	L	E	G	G	E	R	L	G	G	R	A	Y	S	R	E	S	R	N	V	P	G	L	R	V	E	I	G	G	A	Y	L	H	R	K	H	H	P	R	L	A	A	E	L	D	R	Y	G	I	P	T	A	A
Template Known Secondary structure										B														T								S	S	S	S	S	B	T	T							S	S	S	S	S					S	S				B		T	T	T									T	T	S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	T	H	E	S	L	S	L	L	T	P	D	G	V	T	T	F	S	S	L	Q	P	G	G	E	S	W	S	V	L	R	A	R	F	D	P	W	L	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	S	E	F	T	S	F	R	H	R	L	G	P	T	A	V	D	Q	A	F	P	I	P	G	S	E	A	V	A	V	E	A	A	T	Y	T	L	L	R	D	A	H	R	I	D	L	E	K	G	L	E	N	Q	D	L	E	D	L	D	I	P	L	N	E	Y	V	D	K	L	D	L	P	P	V	S	R	Q	F	L	L
Template Known Secondary structure											B	S		T	T	S		S	S	S	S				G	G	G																	T			T	T	T		T	T	S	S	S		T	T	T		S	B
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
																																																			110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	A	E	K	E	G	V	E	C	I	P	G	A	T	V	D	A	L	Y	E	E	N	G	R	V	C	G	V	I	C
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	W	A	W	N	M	L	G	Q	P	A	D	Q	A	S	A	L	W	M	L	Q	L	V	A	A	H	H	Y	S	I	L	G	V	V	L	S	L	D	E	V	F	S	N	G	S	A	D	L	V	D	A	M	S	Q	E	I	P	E	I	R	L	Q	T	V	V	T	G	I	D	Q	S	G	D	V	V	N	V	T	V	K
Template Known Secondary structure									S	S		T	T	T	S	B											T	T	S		S					T	T						S	S		T									T	T		S				S	S									S	S	S	S						S
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure
Query SS confidence
Query Sequence		G	D	D	I	L	R	A	R	Y	V	V	L	A	E	G	A	N	S	V	L	A	E	R	H	G	L	V	T	R	P	A	G	E	A	M	A	L	G	I	K	E	V	L	S	L	E	T	S	A	I	E	E	R	F	H	L	E	N	N	E	G	A	A	L	L	F	S	G	R	I	C	D	D	L	P	G	G	A	F	L
Query Conservation
Alig confidence																																				.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.
Template Sequence		D	G	H	A	F	Q	A	H	S	V	I	V	A	T	P	M	N	T	W	R	R	I	V	F	T	P	A	L	P	E	R	R	R	S	.	.	.	.	.	.	V	I	E	E	G	H	G	G	Q	G	L	K	I	L	I	H	V	R	G	A	E	A	G	I	E	C	V	G	D	G	I	F	P	T	L	Y	D	Y	C	E
Template Known Secondary structure		S	S												S		G	G	G	T	T	T	S				S									.	.	.	.	.	.			T	T															S			T	T					B	S	S	S	S	S
Template Predicted Secondary structure																																				.	.	.	.	.	.
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.							.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.				.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.				290	.	.	.	.
Predicted Secondary structure																																													.	.	.																											.	.	.
Query SS confidence																																													.	.	.																											.	.	.
Query Sequence		Y	T	N	Q	Q	T	L	S	L	G	I	V	C	P	L	S	S	L	T	Q	S	R	V	P	A	S	E	L	L	T	R	F	K	A	H	P	A	V	R	P	L	I	K	.	.	.	N	T	E	S	L	E	Y	G	A	H	L	V	P	E	G	G	L	H	S	M	P	V	Q	Y	A	G	.	.	.	N	G	W	L	L
Query Conservation																																													.	.	.																											.	.	.
Alig confidence																																													.	.	.																											.	.	.
Template Conservation
Template Sequence		V	S	E	S	E	R	L	L	V	A	F	T	D	S	G	S	F	D	P	T	D	I	G	A	V	K	D	A	V	L	Y	Y	L	P	E	V	E	V	L	G	I	D	Y	H	D	W	I	A	D	P	L	F	E	G	P	W	V	A	P	R	V	G	Q	F	S	R	V	H	K	E	L	G	E	P	A	G	R	I	H	F
Template Known Secondary structure			S	S	S										T	T	T			S	S											T	T		T	T											T	T	T		T	T	T	S		S	S					T	T					S	S	G	G	G	G	S			S	S
Template Predicted Secondary structure
Template SS confidence
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	D	A	L	R	S	C	V	N	T	G	I	S	V	R	G	M	D	M	A	L	T	G	A	Q	A	A	A	Q	T	L	I	S	A
Query Conservation
Alig confidence								.	.	.	.	.
Template Conservation								.	.	.	.	.
Template Sequence		V	G	S	D	V	S	.	.	.	.	.	L	E	F	P	G	Y	I	E	G	A	L	E	T	A	E	C	A	V	N	A	I	L	H	S
Template Known Secondary structure			S	S	T	T		.	.	.	.	.	S	S	S	T	T	S
Template Predicted Secondary structure								.	.	.	.	.
Template SS confidence
		396	.	.	.	400	.						.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions