Job Description Q46904 Confidence 99.64% Date Thu Jan 5 12:35:41 GMT 2012 Rank 46 Aligned Residues 315 % Identity 17% Template c3djeA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:fructosyl amine: oxygen oxidoreductase; PDBTitle: crystal structure of the deglycating enzyme fructosamine2 oxidase from aspergillus fumigatus (amadoriase ii) in3 complex with fsa Resolution 1.60 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.																		.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.
Predicted Secondary structure																														.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	E	D	D	C	D	I	I	I	I	G	A	G	I	A	G	T	A	C	A	L	R	C	A	R	A	G	L	.	S	V	L	L	L	E	R	A	E	I	P	G	S	K	N	L	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	R	L	Y	T	H	A	L	A	E	L	L	P	Q	F	H
Query Conservation																														.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																														.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	T	K	S	S	S	L	L	I	V	G	A	G	T	W	G	T	S	T	A	L	H	L	A	R	R	G	Y	T	N	V	T	V	L	D	P	Y	P	V	P	S	A	I	S	A	G	N	D	V	N	K	V	I	S	S	G	Q	Y	S	N	N	K	D	E	I	E	V	N	E	I	L	A	E	E	A	F	N	G	W	K
Template Known Secondary structure				T	T	S								S													T	T									S	S		S	S		T	T		T	T		S	S									S
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80																																								.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	T	A	P	L	E	R	R	I	T	H	E	S	L	S	L	L	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	D	G	V	T	T	F	S	S	L	Q	P	G	G	E	S	W	S	V	L	R	A	R
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	D	P	L	F	K	P	Y	Y	H	D	T	G	L	L	X	S	A	C	S	Q	E	G	L	D	R	L	G	V	R	V	R	P	G	E	D	P	N	L	V	E	L	T	R	P	E	Q	F	R	K	L	A	P	E	G	V	L	Q	G	D	F	P	G	W	K	G	Y	F	A	R	S	G	A	G	W	A	H	A	R	N
Template Known Secondary structure				T	T	T	G	G	G												S													G	G	G		T	T						S						T	T	S		T	T	T	S		S			T	T							S	S	S
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.				.	.	.	.	.	.	130	.	.	.	.	.	.		.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.														.
Query SS confidence																						.	.	.														.
Query Sequence		F	D	P	W	L	V	A	E	A	E	K	E	G	V	E	C	I	P	G	A	.	.	.	T	V	D	A	L	Y	E	E	N	G	R	V	C	.	G	V	I	C	G	D	D	I	L	R	A	R	Y	V	V	L	A	E	G	A	N	S	V	L	A	E	R	H	G	L	V	T	R	P	A	G	E	A	M	A	L	G	I
Query Conservation																						.	.	.														.
Alig confidence																						.	.	.														.																							.	.
Template Conservation																																																													.	.
Template Sequence		A	L	V	A	A	A	R	E	A	Q	R	X	G	V	K	F	V	T	G	T	P	Q	G	R	V	V	T	L	I	F	E	N	N	D	V	K	G	A	V	T	A	D	G	K	I	W	R	A	E	R	T	F	L	C	A	G	A	S	A	.	.	G	Q	F	L	D	F	K	N	Q	L	R	P	T	A	W	T	L	V	H
Template Known Secondary structure													T	T						S	T	T	T	T									T	T								T	T	T						S							G	G	G	G	.	.	G	G	T	S			T	T
Template Predicted Secondary structure																																																													.	.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.			.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.		.	.	.
Predicted Secondary structure																																																																														.
Query SS confidence																																																																														.
Query Sequence		K	E	V	L	S	L	E	T	S	A	I	E	E	R	F	H	L	E	N	N	E	G	A	A	L	L	F	S	G	R	I	C	D	D	L	P	G	G	A	F	L	Y	T	N	Q	Q	T	L	S	L	G	I	V	C	P	L	S	S	L	T	Q	S	R	V	P	A	S	E	L	L	T	R	F	K	A	H	.	P	A	V
Query Conservation																																																																														.
Alig confidence																																																																														.
Template Conservation
Template Sequence		I	A	L	K	P	E	E	R	A	L	Y	K	N	I	P	V	I	F	N	I	E	R	G	F	F	F	E	P	D	E	E	R	G	E	I	K	I	C	D	E	H	P	G	Y	T	N	X	V	Q	S	A	D	G	T	X	X	S	I	P	F	E	K	T	Q	I	P	K	E	A	E	T	R	V	R	A	L	L	K	E	T
Template Known Secondary structure						G	G	G					T	T							T	T	T					S			T	T	T										S									T	T											S	S		B
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.				.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.
Query SS confidence																																								.	.	.
Query Sequence		R	P	L	I	K	N	T	E	S	L	E	Y	G	A	H	L	V	P	E	G	G	L	H	S	M	P	V	Q	Y	A	G	N	G	W	L	L	V	G	.	.	.	D	A	L	R	S	C	V	N	T	G	I	S	V	R	G	M	D	M	A	L	T	G	A	Q	A	A	A	Q	T	L	I
Query Conservation																																								.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.											.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.
Template Sequence		X	P	Q	L	A	D	R	P	F	S	F	A	R	I	C	W	C	A	.	.	.	.	.	.	.	.	.	.	D	T	A	N	R	E	F	L	I	D	R	H	P	Q	Y	H	S	L	V	L	G	C	G	A	S	G	R	G	F	K	Y	L	P	S	I	G	N	L	I	V	D	A	X	E
Template Known Secondary structure			G	G	G	T	T				S									.	.	.	.	.	.	.	.	.	.			T	T	S								S	S		T	T								T	T			G	G	G	T	T	T
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.
Template SS confidence
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.											.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions