Job Description Q46904 Confidence 99.08% Date Thu Jan 5 12:35:41 GMT 2012 Rank 121 Aligned Residues 216 % Identity 21% Template c3cgdB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:pyridine nucleotide-disulfide oxidoreductase, class i; PDBTitle: pyridine nucleotide complexes with bacillus anthracis coenzyme a-2 disulfide reductase: a structural analysis of dual nad(p)h3 specificity Resolution 2.25 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.			.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.							.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																									.	.																																						.	.	.	.	.	.
Query SS confidence																									.	.																																						.	.	.	.	.	.
Query Sequence		C	D	I	I	I	I	G	A	G	I	A	G	T	A	C	A	L	R	C	A	R	A	G	.	.	L	S	V	L	L	L	E	R	A	E	I	P	G	S	K	N	L	S	G	G	R	L	Y	T	H	A	L	A	E	L	L	P	Q	F	H	L	T	.	.	.	.	.	.	A	P	L	E	R	R	I	T	H	E	S	L
Query Conservation																									.	.																																						.	.	.	.	.	.
Alig confidence																									.	.																																						.	.	.	.	.	.
Template Conservation
Template Sequence		M	N	Y	V	I	I	G	G	D	A	A	G	M	S	A	A	M	Q	I	V	R	N	D	E	N	A	N	V	V	T	L	E	K	G	E	I	Y	S	Y	A	Q	C	G	L	P	Y	V	I	S	G	A	I	A	S	T	E	K	L	I	A	R	N	V	K	T	F	R	D	K	Y	G	I	D	A	K	V	R	H	E	V
Template Known Secondary structure										S															T	T								S	S	S			S	B		G	G	G						T	T	S	S	S		G	G	G	G	B	S	S								T	T						S	S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	L	L	T	P	D	G	V	T	T	F	S	S	L	Q	P	G	G	E	S	W	S	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	K	V	D	T	E	K	K	I	V	Y	A	E	H	T	K	T	K	D	V	F	E	F	S	Y	D	R	L	L	I	A	T	G	V	R	P	V	M	P	E	W	E	G	R	D	L	Q	G	V	H	L	L	K	T	I	P	D	A	E	R	I	L	K	T	L	E	T	N	K	V	E	D	V	T	I	I	G	G	G	A
Template Known Secondary structure						T	T	T	T							T	T	T									S																B	T	T	T	S	B	T					S	S														S											S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
																														100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	R	A	R	F	D	P	W	L	V	A	E	A	E	K	E	G	V	E	C	I	P	G	A	T	V	D	A	L	Y	E	E	N	G	R	V	C	G	V	I	C	G	D	D	I	L	R	A	R	Y	V	V
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.
Template Conservation																																																												.
Template Sequence		I	G	L	E	M	A	E	T	F	V	E	L	G	K	K	V	R	M	I	E	R	N	D	H	I	G	T	I	Y	D	G	D	M	A	E	Y	I	Y	K	E	A	D	K	H	H	I	E	I	L	T	N	E	N	V	K	A	F	K	.	G	N	E	R	V	E	A	V	E	T	D	K	G	T	Y	K	A	D	L	V	L
Template Known Secondary structure													T	T								S	S	S	S	S	S	T	T	S															T	T						S								.		S	S	B							S	S						S
Template Predicted Secondary structure																																																												.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.		.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	E	G	A	N	S	V	L	A	E	R	H	G	L	V	T	R	P	A	G	E	A	M	A	L	G	I	K	E	V	L	S	L	E	T	S	A	I	E	E	R	F	H	L	E	N	N	E	G	A	A	L	L	F	S	G	R	I	C	D	D	L	P	G	G	A	F	L	Y	T	N	Q	Q	T	L	S	L	G	I
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	S	V	G	V	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		240	.	.	.	.	.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	C	P	L	S	S	L	T	Q	S	R	V	P	A	S	E	L	L	T	R	F	K	A	H	P	A	V	R	P	L	I	K	N	T	E	S	L	E	Y	G	A	H	L	V	P	E	G	G	L	H	S	M	P	V	Q	Y	A	G	N	G	W	L	L	V	G	D	A	L	R	S	C	V	N	T	G	I	S	V	R	G
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.																		.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.																		.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	N	T	D	F	L	E	G	T	N	I	R	T	N	H	K	G	A	I	E	V	N	A	Y	M	.	.	.	.	.	Q	T	N	V	Q	D	V	Y	A	A	G	D	C	A	T	H	Y	.	.	H	V	I	K	E	I	H
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S		G	G	G	T	T	S				B		T	T	S		B				T	T	S	.	.	.	.	.	B		S	S	T	T					G	G	G	B				.	.	B	T	T	T		S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.																		.	.
Template SS confidence
																										246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270						.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.			.	.	290	.	.	.	.
		312						.	.	.	.	.	.	.	320	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.
Query SS confidence			.	.	.	.	.
Query Sequence		M	.	.	.	.	.	D	M	A	L	T	G	A	Q	A	A	A	Q	T	L
Query Conservation			.	.	.	.	.
Alig confidence			.	.	.	.	.
Template Conservation
Template Sequence		D	H	I	P	I	G	T	T	A	N	K	Q	G	R	L	A	G	L	N	M
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.

No model constructed - rank, confidence too low

---

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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