Job Description Q46904 Confidence 99.91% Date Thu Jan 5 12:35:41 GMT 2012 Rank 30 Aligned Residues 301 % Identity 14% Template c2weuD_ PDB info PDB header:antifungal protein Chain: D: PDB Molecule:tryptophan 5-halogenase; PDBTitle: crystal structure of tryptophan 5-halogenase (pyrh) complex2 with substrate tryptophan Resolution 1.70 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.				.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.				.	.	.	.	.	.	.	.	80
Predicted Secondary structure																						.	.	.																																														.	.	.
Query SS confidence																						.	.	.																																														.	.	.
Query Sequence		I	I	I	I	G	A	G	I	A	G	T	A	C	A	L	R	C	A	R	A	.	.	.	G	L	S	V	L	L	L	E	R	A	E	I	P	G	S	K	N	L	S	G	G	R	L	Y	T	H	A	L	A	E	L	L	P	Q	F	H	L	T	A	P	L	E	R	R	I	.	.	.	T	H	E	S	L	S	L	L	T
Query Conservation																						.	.	.																																														.	.	.
Alig confidence																						.	.	.										.	.	.	.	.	.	.	.																													.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.
Template Sequence		V	V	I	V	G	G	G	T	A	G	W	M	T	A	S	Y	L	K	A	A	F	D	D	R	I	D	V	T	L	V	E	S	.	.	.	.	.	.	.	.	G	V	G	E	A	T	F	S	T	V	R	H	F	F	D	Y	L	G	L	D	E	R	E	W	L	P	R	C	A	G	G	Y	K	L	G	I	R	F	E	N
Template Known Secondary structure																							G	G	G	S								.	.	.	.	.	.	.	.								T	T									T							T	T	T	T	T											S
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.									.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		81	.	.	.																																																															.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	D	G	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	F	S	S	L	Q	P	G	G	E	S	W	S
Query Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		W	S	E	P	G	E	Y	F	Y	H	P	F	E	R	L	R	V	V	D	G	F	N	M	A	E	W	W	L	A	V	G	D	T	S	F	S	E	A	C	Y	L	T	H	R	L	C	E	A	K	R	A	P	R	M	L	D	G	S	L	F	A	S	L	G	R	S	T	L	A	E	Q	R	A	Q	F	P	Y	A	Y	H
Template Known Secondary structure		S	S	S	T	T							S							T	T											T																	T	T	B		S	B		T	T	S		B						S			G	G	G			S
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.			.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.		160	.	.	.	.	.	.	.					.	.	170	.
Predicted Secondary structure																																						.	.																										.									.	.	.	.
Query SS confidence																																						.	.																										.									.	.	.	.
Query Sequence		V	L	R	A	R	F	D	P	W	L	V	A	E	A	E	K	E	G	V	E	C	I	P	G	A	T	V	D	A	L	Y	E	E	N	G	R	.	.	V	C	G	V	I	C	G	D	D	I	L	R	A	R	Y	V	V	L	A	E	G	A	N	S	V	.	L	A	E	R	H	G	L	V	.	.	.	.	T	R	P	A
Query Conservation																																						.	.																										.									.	.	.	.
Alig confidence																										.												.	.																										.									.	.	.	.
Template Conservation																										.
Template Sequence		F	D	A	D	E	V	A	R	Y	L	S	E	Y	A	I	A	R	G	V	R	H	V	V	D	.	D	V	Q	H	V	G	Q	D	E	R	G	W	I	S	G	V	H	T	K	Q	H	G	E	I	S	G	D	L	F	V	D	C	T	G	F	R	G	L	L	I	N	Q	T	L	G	G	R	F	Q	S	F	S	D	V	L
Template Known Secondary structure																		T	T							.									T	T	S								S	S	S						S							G	G	G								T								T	T	T
Template Predicted Secondary structure																										.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.		.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	A	M	A	L	G	I	K	E	V	L	S	L	E	T	S	A	I	E	E	R	F	H	L	E	N	N	E	G	A	A	L	L	F	S	G	R	I	C	D	D	L	P	G	G	A	F	L	Y	T	N	Q	Q	T	L	S	L	G	I	V	C	P	L	S	S	L	T	Q	S	R	V	P	A	S	E	L	L	T	R
Query Conservation
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.
Template Sequence		P	N	N	R	A	V	A	L	R	V	P	R	E	N	D	E	D	M	R	P	Y	T	T	A	T	A	M	S	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	M	W	T	I	P	L	F	K	R	D	G	N	G	Y	V	Y	S	D	E	F	I	S	P	.	.	.	.	.	E	E	A	E	R	E
Template Known Secondary structure														S	S	G	G	G			S	S							T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								S	S										T	T	T	S			.	.	.	.	.
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.																.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.						.	.	.	.	.	.
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	K	A	H	P	A	V	R	P	L	I	K	N	T	E	S	L	E	Y	G	A	H	L	V	P	E	G	G	L	H	S	M	P	V	Q	Y	A	G	N	G	W	L	L	V	G	D	A	L	R	S	C	V	N	T	G	I	S	V	R	G	M	D	M	A	L	T	G	A	Q	A	A	A	Q	T	L	I	S	A	C	Q
Query Conservation
Alig confidence																										.	.	.	.	.	.	.	.	.																			.	.																								.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.																			.	.																								.	.	.
Template Sequence		L	R	S	T	V	A	P	G	R	D	D	L	E	A	N	H	I	Q	M	R	I	G	R	N	.	.	.	.	.	.	.	.	.	E	R	T	W	I	N	N	C	V	A	V	G	L	S	A	A	F	V	.	.	E	P	L	E	S	T	G	I	F	F	I	Q	H	A	I	E	Q	L	V	K	H	F	P	.	.	.	G
Template Known Secondary structure								T	T		T	T	S													.	.	.	.	.	.	.	.	.	S		S			T	T					S	T	T	T				.	.		G	G	G																	T			.	.	.
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.																			.	.																								.	.	.
Template SS confidence
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.										.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350			.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.				.
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Predicted Secondary structure
Query SS confidence
Query Sequence		H	R	E	P	Q	N	L	F	P	L	Y	H	H	N	V	E	R	S	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	R	W	D	P	V	L	I	S	A	Y	N	E	R	M	A	H	M	V
Template Known Secondary structure		T	T
Template Predicted Secondary structure
Template SS confidence
		375	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions