Return to main results Retrieve Phyre Job Id

Job DescriptionQ46904
Confidence95.94%DateThu Jan 5 12:35:41 GMT 2012
Rank341Aligned Residues37
% Identity27%Templatec2g1uA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:hypothetical protein tm1088a; PDBTitle: crystal structure of a putative transport protein (tm1088a) from2 thermotoga maritima at 1.50 a resolution
Resolution1.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30........
Predicted Secondary structure 












Query SS confidence 




































Query Sequence  EDDCDIIIIGAGIAGTACALRCARAGLSVLLLERAEI
Query Conservation      







 


  
  

  
  
 
 
    
Alig confidence 




































Template Conservation       


 
 
  
  

  
   
  



     
Template Sequence  QKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEY
Template Known Secondary structure 





STT
S
GG
Template Predicted Secondary structure 












Template SS confidence 




































   5....10.........20.........30.........40.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions