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Job DescriptionQ46904
Confidence99.00%DateThu Jan 5 12:35:41 GMT 2012
Rank134Aligned Residues152
% Identity26%Templatec1ebdB_
PDB info PDB header:complex (oxidoreductase/transferase)Chain: B: PDB Molecule:dihydrolipoamide dehydrogenase; PDBTitle: dihydrolipoamide dehydrogenase complexed with the binding2 domain of the dihydrolipoamide acetylase
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.......
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Query Sequence  DCDIIIIGAGIAGTACALRCARAGLSVLLLERAEIPGSKNLSGG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALISASHRYEQAKHSEEMGIKAENVTIDFAKV
Template Known Secondary structure 
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   910.........20.........30.........40.........50.........60.........70.........80........
 
   48.50...
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . RLYTHA
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Template Sequence  QEWKASVVKKLTGGVEGLLKGNKVEIVKGEAYFVDANTVRVVNGDSAQTYTFKNAIIATGSRPIELPNFKFSNRILDSTG
Template Known Secondary structure  TT
STTTT
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TT


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   8990.........100.........110.........120.........130.........140.........150.........160........
 
   54.....60.........70.........80.........90.........100.........110.........120.........130...
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Query Sequence  LAELLPQFHLTAPLERRITHESLSLLTPDGVTTFSSLQPGGESWSVLRARFDPWLVAEAEKEGVECIPGATVDALYEENG
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Template Sequence  ALNLGEVPKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILSGFEKQMAAIIKKRLKKKGVEVVTNALAKGAEERED
Template Known Secondary structure  T
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   169170.........180.........190.........200.........210.........220.........230.........240........
 
   134.....140. ........150.....
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Query Sequence  RVCGVICG. . . DDILRARYVVLAEG
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Template Sequence  GVTVTYEANGETKTIDADYVLVTVG
Template Known Secondary structure  STTS
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   249250.........260.........270...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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