Job Description P30011 Confidence 76.08% Date Thu Jan 5 11:45:42 GMT 2012 Rank 270 Aligned Residues 111 % Identity 24% Template d1ykwa1 SCOP info TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Resolution 2.00

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		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.				.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.							.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure																																			.	.	.																						.	.	.	.	.	.
Query SS confidence																																			.	.	.																						.	.	.	.	.	.
Query Sequence		Y	A	V	L	C	G	G	G	A	N	H	R	L	G	L	S	D	A	F	L	I	K	E	N	H	I	I	A	S	G	S	V	R	.	.	.	Q	A	V	E	K	A	S	W	L	H	P	D	A	P	V	E	V	E	V	E	N	.	.	.	.	.	.	L	E	E	L	D	E	A	L	K	A	G	A	D	I	I	M	L
Query Conservation																																			.	.	.																						.	.	.	.	.	.
Alig confidence											.	.	.																						.	.	.																						.	.	.	.	.	.
Template Conservation											.	.	.
Template Sequence		Y	Q	S	W	L	G	G	L	D	.	.	.	I	A	K	D	D	E	M	L	A	D	V	T	W	S	S	I	E	E	R	A	A	H	L	G	K	A	R	R	K	A	E	A	E	T	G	E	P	K	I	Y	L	A	N	I	T	D	E	V	D	S	L	M	E	K	H	D	V	A	V	R	N	G	A	N	A	L	L	I
Template Known Secondary structure							T	T		S	.	.	.						T	T		S	S	B	T	T	B																					S	S												G	G	G												T
Template Predicted Secondary structure											.	.	.
Template SS confidence
		187	.	.	190	.	.	.	.	.				.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
		236																																																																	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	F	E	T	E	Q	M	R	E	A	V	K	R	T	N
Query Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	A	L	P	V	G	L	S	A	V	R	M	L	S	N	Y	T	Q	V	P	L	I	G	H	F	P	F	I	A	S	F	S	R	M	E	K	Y	G	I	H	S	K	V	M	T	K	L	Q	R	L	A	G	L	D	A	V	I	M	P	G	F	G	D	R	V	M	T	P	E	E	E	V	L	E	N	V	I	E	C	T
Template Known Secondary structure																			S	S							T	T	T						S	T	T	S	S														T		S							S	S	T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
								252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.		.	.		.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.																						.			.
Query SS confidence		.	.	.	.	.	.																						.			.
Query Sequence		.	.	.	.	.	.	G	K	A	L	L	E	V	S	G	N	V	T	D	K	T	L	R	E	F	A	E	.	T	G	.	V	D	F	I
Query Conservation		.	.	.	.	.	.																						.			.
Alig confidence		.	.	.	.	.	.																						.			.
Template Conservation
Template Sequence		K	P	M	G	R	I	K	P	C	L	P	V	P	G	G	S	D	S	A	L	T	L	Q	T	V	Y	E	K	V	G	N	V	D	F	G
Template Known Secondary structure		S			T	T											S	B		T	T	T										S	S		S
Template Predicted Secondary structure
Template SS confidence
		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions