 |
Job Description | P30011 | Confidence | 93.39% | Date | Thu Jan 5 11:45:42 GMT 2012 |
Rank | 172 | Aligned Residues | 85 |
% Identity | 15% | Template | d1ep3a_ |
SCOP info | TIM beta/alpha-barrel
| FMN-linked oxidoreductases
| FMN-linked oxidoreductases
|
Resolution | 2.10 |
|
 |
  |   |
196 | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | |
|
|
|
. | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | 240 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  | . | . | . | . |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
Query Sequence |   |
V | R | Q | A | V | E | K | A | S | W | L | H | P | D | A | P | V | E | V | E | V | E | N | L | E | E | . |
. |
. |
. |
L | D | E | A | L | K | A | G | A | D | I | I | M | L | D | N | F | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
E | T | E |
Query Conservation |   |
  |   |   |
|
|   |   |   |
|   |   |   |
|   |   |   |
|   |
|
|
|
|
|   |
|
| . | . | . | . |
|   |
|
|   |   |   |
|
|
|   |
|   |
|
|
|   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
Template Conservation |   |
  |   |
|
|
|   |   |   |
|   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |
Template Sequence |   |
A | A | A | L | V | K | A | C | K | A | V | S | K | V | P | L | Y | V | K | L | S | P | N | V | T | D | I | V | P | I | A | K | A | V | E | A | A | G | A | D | G | L | T | M | I | N | T | L | M | G | V | R | F | D | L | K | T | R | Q | P | I | L | A | N | I | T | G | G | L | S | G | P | A | I | K | P | V | A | L | K |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
| S | S |
|  |  |  |  |  |
| S |
| S | S |
| S |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |
|
|
|  |  |  |
|
| B |
| T | T | T |
| S | B | S | S | T | T | S |
|  |  |  |  | S | G | G | G |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
152 | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . |
  |
  |   |
242 | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | |
. | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
| . |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | M | R | E | A | V | K | R | T | N | G | K | A | L | L | E | V | S | G | N | . |
V | T | D | K | T | L | R | E | F | A | E | T | G | V | D | F | I | S | V | G | A |
Query Conservation |   |
  |
|
|   |
|
|   |   |   |   |   |   |
|   |
|
|
|
|
|
| . |
|   |   |   |   |
|   |   |   |
|   |   |
|
|
|   |
|
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |   |   |   |   | . | . |   |
|
|
|
|   |   |
|
|
|   |   |   |   |
|   |   |
|   |
|
|   |
|
|
|   |
|   |
|
|
|
Template Sequence |   |
L | I | H | Q | V | A | Q | D | V | . |
. |
D | I | P | I | I | G | M | G | G | V | A | N | A | Q | D | V | L | E | M | Y | M | A | G | A | S | A | V | A | V | G | T |
Template Known Secondary structure |   |
 |  |  |  |  |  | T | T |
| . | . | S | S |
|  |  |  |
| S | S |
|
| S |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |  |
| T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
| . | . |
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
232 | . | . | . | . | . | . | . | 240 | |
|
. | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|