Return to main results Retrieve Phyre Job Id

Job DescriptionP30011
Confidence90.03%DateThu Jan 5 11:45:42 GMT 2012
Rank200Aligned Residues127
% Identity17%Templatec3qyqC_
PDB info PDB header:lyaseChain: C: PDB Molecule:deoxyribose-phosphate aldolase, putative; PDBTitle: 1.8 angstrom resolution crystal structure of a putative deoxyribose-2 phosphate aldolase from toxoplasma gondii me49
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   155....160.........170.........180.........190.........200...... ...210......... 220. ....
Predicted Secondary structure 





















..





.......
Query SS confidence 



















































. .












. .

. . . . .



Query Sequence  TLPGLRSALKYAVLCGGGANHRLGLSDAFLIKENHIIASGSVRQAVEKASWL. . HPDAPVEVEVENL. . EE. . . . . LDEA
Query Conservation 
 

 
   
 

  


  

  
 
 







   
    

   
  .. 
   
 




 ..

.....
 

Alig confidence 





























.




















..












..

.....



Template Conservation    
  
  

  

  

 


 


   
.

        
  

  
  
     






  
   
 
  
  

Template Sequence  GTPDTVSLEAVGALKDGADEIECLIDWRRM. NENVADGESRIRLLVSEVKKVVGPKTLKVVLSGGELQGGDIISRAAVAA
Template Known Secondary structure 

TT
S

.
TTS

TTTSSS
Template Predicted Secondary structure 







.















Template SS confidence 















































































   86...90.........100.........110..... ....120.........130.........140.........150.........160....
 
   226...230......... 240.........250 .........260.. .......270. .....
Predicted Secondary structure 







......................






.
.....



.
Query SS confidence 













. . . . . .










. . . . . . . . . . . . . . . .











.








. . . . .




.
Query Sequence  LKAGADIIMLDNFE. . . . . . TEQMREAVKRT. . . . . . . . . . . . . . . . NGKALLEVSGNV. TDKTLREFA. . . . . ETGVD.
Query Conservation     


 
 


  ...... 
 

 

   ................   
 






.    
   
.....  


.
Alig confidence 













......










................











.








.....




.
Template Conservation    











   


 
 
 

   
                   










   
   
 
    


  
Template Sequence  LEGGADFLQTSSGLGATHATMFTVHLISIALREYMVRENERIRVEGINRCIGIKIEVGDVHMAETADFLMQMIFENGPRS
Template Known Secondary structure  T
SS

SSSS



T




T


GGG
Template Predicted Secondary structure 




































Template SS confidence 















































































   165....170.........180.........190.........200.........210.........220.........230.........240....
 
   277..280..
Predicted Secondary structure  ......
Query SS confidence  . . . . . .





Query Sequence  . . . . . . FISVGA
Query Conservation  ...... 



 
Alig confidence  ......





Template Conservation       






Template Sequence  IVRDKFRVGGGF
Template Known Secondary structure 
STTT
Template Predicted Secondary structure 








Template SS confidence 











   251........260..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions