Job Description P30011 Confidence 91.08% Date Thu Jan 5 11:45:42 GMT 2012 Rank 191 Aligned Residues 111 % Identity 14% Template c3qfwB_ PDB info PDB header:lyase Chain: B: PDB Molecule:ribulose-1,5-bisphosphate carboxylase/oxygenase large PDBTitle: crystal structure of rubisco-like protein from rhodopseudomonas2 palustris Resolution 1.79 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.				.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.							.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure																																			.	.	.																						.	.	.	.	.	.
Query SS confidence																																			.	.	.																						.	.	.	.	.	.
Query Sequence		Y	A	V	L	C	G	G	G	A	N	H	R	L	G	L	S	D	A	F	L	I	K	E	N	H	I	I	A	S	G	S	V	R	.	.	.	Q	A	V	E	K	A	S	W	L	H	P	D	A	P	V	E	V	E	V	E	N	.	.	.	.	.	.	L	E	E	L	D	E	A	L	K	A	G	A	D	I	I	M	L
Query Conservation																																			.	.	.																						.	.	.	.	.	.
Alig confidence											.	.	.																						.	.	.																						.	.	.	.	.	.
Template Conservation											.	.	.
Template Sequence		H	Q	L	A	L	G	G	V	D	.	.	.	L	I	K	D	D	H	G	L	A	D	Q	A	F	S	P	F	A	E	R	A	A	A	V	G	K	A	V	R	E	A	N	A	A	R	G	G	R	T	L	Y	A	P	N	I	S	G	T	L	D	D	M	R	R	Q	L	G	V	I	R	D	E	G	I	G	A	V	L	V
Template Known Secondary structure							T	T		S	.	.	.						T	T		S	S		T	T	S																					T								B			S	S															T
Template Predicted Secondary structure											.	.	.
Template SS confidence
		153	.	.	.	.	.	.	160	.				.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		236																																																													.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.
Query Sequence		D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	F	E	T	E	Q	M	R	E	A	V	K	R	T	N	.	.	.	.
Query Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.
Template Conservation
Template Sequence		A	P	M	I	V	G	V	S	N	F	H	A	I	V	K	E	A	A	G	L	V	V	V	A	H	P	A	M	A	G	A	A	K	I	A	A	P	L	L	L	G	R	L	F	R	L	F	G	A	D	A	T	V	F	P	N	Y	G	G	R	F	A	Y	S	T	A	S	C	L	A	L	A	Q	A	A	R	D	P	F	G
Template Known Secondary structure																T	T		T	T								T	T	T	T	S	S		B							T							T		S							T	T	S	S	S																S			T
Template Predicted Secondary structure
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
				252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.		.	.	.	.	.	.
Predicted Secondary structure		.	.																						.
Query SS confidence		.	.																						.
Query Sequence		.	.	G	K	A	L	L	E	V	S	G	N	V	T	D	K	T	L	R	E	F	A	E	.	T	G	V	D	F	I
Query Conservation		.	.																						.
Alig confidence		.	.																						.
Template Conservation
Template Sequence		K	L	N	A	C	I	P	T	P	A	G	G	I	M	L	Q	R	V	N	E	L	L	R	F	Y	G	Q	D	V	M
Template Known Secondary structure		T										S	S			T	T	T										S	S
Template Predicted Secondary structure
Template SS confidence
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions