Job Description P30011 Confidence 99.92% Date Thu Jan 5 11:45:42 GMT 2012 Rank 26 Aligned Residues 259 % Identity 14% Template c3os4A_ PDB info PDB header:transferase Chain: A: PDB Molecule:nicotinate phosphoribosyltransferase; PDBTitle: the crystal structure of nicotinate phosphoribosyltransferase from2 yersinia pestis Resolution 1.60 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Y	N	P	D	T	R	R	D	E	L	L	E	R	I	N	L	D	I	P	G	A	V	A	Q	A	L	R	E	D	L	G	G	T	V	D	A	N	N	D	I	T	A	K	L	L	P	E	N	S	R	S	H	A	T	V	I	T	R	E	N	G	V	F	C	G	K	R	W	V	E	E	V	F	I	Q	L	A	G	D
Query Conservation
Alig confidence											.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	S	D	E	L	L	G	V	Y	.	.	A	D	E	I	R	H	Q	V	T	L	X	G	Q	L	A	L	T	S	D	E	F	I	Y	L	S	S	L	P	F	F	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	D	Y	L	H	W	L	R	D	F	R	F	K
Template Known Secondary structure			S	S				G	G	G	.	.												T	T													T	S	S	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure											.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		42	.	.	.	.	.	.	.	50			.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.																										.	.	.	.	.	.	.	.	90	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.							.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.															.	.
Predicted Secondary structure																																												.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	V	T	I	I	W	H	V	D	D	G	D	V	I	N	A	N	Q	S	L	F	E	L	E	G	P	S	R	V	L	L	T	G	E	R	T	A	L	N	F	V	Q	.	.	.	.	.	.	T	L	S	G	V	A	S	K	V	R	H	Y	V	E	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	G
Query Conservation																																												.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.																															.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.
Template Sequence		P	E	Q	V	S	V	.	.	.	.	.	.	A	V	H	D	G	K	L	D	I	R	I	A	G	L	W	C	E	V	I	X	W	E	V	P	L	L	A	V	I	S	E	I	V	H	R	R	R	S	T	Q	V	T	T	D	Q	A	V	Q	Q	L	R	T	K	L	E	Q	F	N	A	L	S	A	D	I	D	I	T	H
Template Known Secondary structure		G	G	G				.	.	.	.	.	.				T	T														T	T	S																		T	T																					T	T	T	S			T	T
Template Predicted Secondary structure								.	.	.	.	.	.
Template SS confidence
		95	.	.	.	.	100							.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.				.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.						.	.	.	.	.			190	.	.	.	.									.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure																.	.	.																											.	.	.	.	.						.	.						.	.	.	.	.	.	.	.
Query SS confidence																.	.	.																											.	.	.	.	.						.	.						.	.	.	.	.	.	.	.
Query Sequence		T	N	T	Q	L	L	D	T	R	K	T	L	P	G	.	.	.	L	R	S	A	L	K	Y	A	V	L	C	G	G	G	A	N	H	R	L	G	L	S	D	A	F	L	.	.	.	.	.	I	K	E	N	H	.	.	I	I	A	S	G	.	.	.	.	.	.	.	.	S	V	R	Q	A	V	E	K	A	S	W	L
Query Conservation																.	.	.																											.	.	.	.	.						.	.						.	.	.	.	.	.	.	.
Alig confidence																.	.	.																											.	.	.	.	.						.	.						.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	K	L	X	D	F	G	T	R	R	R	F	S	R	E	I	Q	H	T	V	V	S	T	L	K	D	E	F	P	Y	L	V	G	T	S	N	Y	D	L	A	R	T	L	A	L	A	P	V	G	T	Q	A	H	E	W	F	Q	A	H	Q	Q	I	S	P	T	L	A	N	S	Q	R	V	A	L	Q	V	W	L	D	E
Template Known Secondary structure									S	T	T		S																	T	T					S	B								T			B													T	T	T	S	S	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		207	.	.	210	.	.	.	.	.	.	.	.	.							220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.					.	.	.	.	.	.	.	.	250	.		.	.	.	.			.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure															.	.	.	.	.	.																							.	.	.	.											.					.	.																.	.	.
Query SS confidence															.	.	.	.	.	.																							.	.	.	.											.					.	.																.	.	.
Query Sequence		H	P	D	A	P	V	E	V	E	V	E	N	L	.	.	.	.	.	.	E	E	L	D	E	A	L	K	A	G	A	D	I	I	M	L	D	N	F	E	T	E	.	.	.	.	Q	M	R	E	A	V	K	R	T	N	.	G	K	A	L	.	.	L	E	V	S	G	N	V	T	D	K	T	L	R	E	F	.	.	.
Query Conservation															.	.	.	.	.	.																							.	.	.	.											.					.	.																.	.	.
Alig confidence															.	.	.	.	.	.																							.	.	.	.											.					.	.																.	.	.
Template Conservation
Template Sequence		Y	P	N	Q	L	G	I	A	L	T	D	C	I	T	X	D	A	F	L	R	D	F	D	L	A	F	A	N	R	Y	Q	G	L	R	H	D	S	G	D	P	I	E	W	G	E	K	A	I	A	H	Y	E	K	L	G	I	D	P	X	K	K	V	L	V	F	S	D	N	L	D	L	E	K	A	L	F	L	Y	R	H
Template Known Secondary structure			S	S	S	S							S	S																	S							S	S																T	T			G	G	G	S						S	S
Template Predicted Secondary structure
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
			271	.	.	.	.	.	.	.	.	280	.	.		.	.	.	.	.				.	.	290	.	.	.	.	.	.
Predicted Secondary structure		.													.						.	.	.
Query SS confidence		.													.						.	.	.
Query Sequence		.	A	E	T	G	V	D	F	I	S	V	G	A	.	L	T	K	H	V	.	.	.	Q	A	L	D	L	S	M	R	F
Query Conservation		.													.						.	.	.
Alig confidence		.													.						.	.	.
Template Conservation
Template Sequence		F	Y	Q	R	I	K	L	V	F	G	I	G	T	R	L	T	C	D	I	P	D	V	K	P	L	N	I	V	I	K	L
Template Known Secondary structure			T	T	T	S												S			T	T
Template Predicted Secondary structure
Template SS confidence
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions