Job Description P30011 Confidence 95.49% Date Thu Jan 5 11:45:42 GMT 2012 Rank 148 Aligned Residues 111 % Identity 17% Template c3navB_ PDB info PDB header:lyase Chain: B: PDB Molecule:tryptophan synthase alpha chain; PDBTitle: crystal structure of an alpha subunit of tryptophan synthase from2 vibrio cholerae o1 biovar el tor str. n16961 Resolution 2.10 Å

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		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.							.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.								.	.	.	.	.	220	.		.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.																					.	.	.	.	.	.	.								.																.
Query SS confidence																									.	.	.	.	.	.																					.	.	.	.	.	.	.								.																.
Query Sequence		G	A	N	H	R	L	G	L	S	D	A	F	L	I	K	E	N	H	I	I	A	S	G	.	.	.	.	.	.	S	V	R	Q	A	V	E	K	A	S	W	L	H	P	D	A	P	V	E	V	.	.	.	.	.	.	.	E	V	E	N	L	E	E	.	L	D	E	A	L	K	A	G	A	D	I	I	M	L	D	.
Query Conservation																									.	.	.	.	.	.																					.	.	.	.	.	.	.								.																.
Alig confidence																									.	.	.	.	.	.																					.	.	.	.	.	.	.								.																.
Template Conservation
Template Sequence		G	M	P	F	S	D	P	L	A	D	G	P	T	I	Q	G	A	N	L	R	A	L	A	A	K	T	T	P	D	I	C	F	E	L	I	A	Q	I	R	A	R	N	P	E	T	P	I	G	L	L	M	Y	A	N	L	V	Y	A	R	G	I	D	D	F	Y	Q	R	C	Q	K	A	G	V	D	S	V	L	I	A	D
Template Known Secondary structure								T	T																T	T																		T	T	S													T	T													T							T	T
Template Predicted Secondary structure
Template SS confidence
		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
																												237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.																						.	.	.	.	.	.	.	260	.	.		.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	F	E	T	E	Q	M	R	E	A	V	K	R	T	N	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	A	L	L	E	V	S	G	N	V	.	T	D	K	T	L	R
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Template Conservation
Template Sequence		V	P	T	N	E	S	Q	P	F	V	A	A	A	E	K	F	G	I	Q	P	I	F	I	A	P	P	T	A	S	D	E	T	L	R	A	V	A	Q	L	G	K	G	Y	T	Y	L	L	S	R	A	P	V	H	A	L	L	E	R	L	Q	Q	F	D	A	P	P	A	L	L	G	F	G	I	S	E	P	A	Q	V	K
Template Known Secondary structure		S		G	G	G											T	T									T	T			S												S																				T	T								S	S			S
Template Predicted Secondary structure
Template SS confidence
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
		269	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	F	A	E	T	G	V	D	F	I	S	V	G	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	A	I	E	A	G	A	A	G	A	I	S	G	S
Template Known Secondary structure						T	T		S					S	S
Template Predicted Secondary structure
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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