Job Description P30011 Confidence 91.65% Date Thu Jan 5 11:45:42 GMT 2012 Rank 185 Aligned Residues 148 % Identity 15% Template c3ldvB_ PDB info PDB header:lyase Chain: B: PDB Molecule:orotidine 5'-phosphate decarboxylase; PDBTitle: 1.77 angstrom resolution crystal structure of orotidine 5'-2 phosphate decarboxylase from vibrio cholerae o1 biovar3 eltor str. n16961 Resolution 1.77 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.			.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure																															.	.
Query SS confidence																															.	.
Query Sequence		L	S	G	V	A	S	K	V	R	H	Y	V	E	L	L	E	G	T	N	T	Q	L	L	D	T	R	K	T	L	.	.	P	G	L	R	S	A	L	K	Y	A	V	L	C	G	G	G	A	N	H	R	L	G	L	S	D	A	F	L	I	K	E	N	H	I	I	A	S	G	S	V	R	Q	A	V	E	K	A	S	W
Query Conservation																															.	.
Alig confidence																															.	.																									.	.	.	.	.	.	.	.	.	.
Template Conservation																																																									.	.	.	.	.	.	.	.	.	.
Template Sequence		K	E	M	F	T	L	F	G	P	D	F	V	R	E	L	H	K	R	G	F	S	V	F	L	D	L	K	F	H	D	I	P	N	T	C	S	K	A	V	K	A	A	A	E	L	G	V	W	M	V	N	V	H	A	S	.	.	.	.	.	.	.	.	.	.	G	G	E	R	M	M	A	A	S	R	E	I	L	E	P
Template Known Secondary structure																			T	T											S																T		S						G	G	.	.	.	.	.	.	.	.	.	.	G													G	G
Template Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.	.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90											.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		206	.	.	.	210	.	.	.	.	.	.	.																							.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.
Query Sequence		L	H	P	D	A	P	V	E	V	E	V	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	L	E	E	L	D	E	A	L	K	A	G	A	D	I	I	M	L	D	N	F	E	T	E	Q	M	R	E	A	V	K	R	T	N	G	K	A	L	L	E	V	S	G	.	.	.
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.																								.	.	.
Template Conservation																																																					.	.	.
Template Sequence		Y	G	K	E	R	P	L	L	I	G	V	T	V	L	T	S	M	E	S	A	D	L	Q	G	I	G	I	L	S	A	P	Q	D	H	V	L	R	L	A	T	L	T	K	N	A	G	L	D	G	V	V	.	.	.	C	S	A	Q	E	A	S	L	L	K	Q	H	L	G	R	E	F	K	L	V	T	P	G	I	R	P
Template Known Secondary structure		G	G	G	G	S								S		T	T									T	T			S																T	T						.	.	.			T	T	T										T	T	S
Template Predicted Secondary structure																																																					.	.	.
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.				.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
			261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	N	V	T	D	K	T	L	R	E	F	A	E	T	G	V	D	F	I	S	V	G	A	L	T	K	H	V	Q
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		A	Q	R	R	I	M	T	P	A	Q	A	I	A	S	G	S	D	Y	L	V	I	G	R	P	I	T	Q	A	A
Template Known Secondary structure				T	T	S										T		S										T		S
Template Predicted Secondary structure
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions