Return to main results Retrieve Phyre Job Id

Job DescriptionP30011
Confidence28.40%DateThu Jan 5 11:45:42 GMT 2012
Rank473Aligned Residues64
% Identity28%Templatec3cyvA_
PDB info PDB header:lyaseChain: A: PDB Molecule:uroporphyrinogen decarboxylase; PDBTitle: crystal structure of uroporphyrinogen decarboxylase from2 shigella flexineri: new insights into its catalytic3 mechanism
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   218.220.........230...... ...240.........250.. .......260.........270.........
Predicted Secondary structure 





.............




.....









Query SS confidence 


















. . . . . . . . . . . . .















. . . . .


























Query Sequence  NLEELDEALKAGADIIMLD. . . . . . . . . . . . . NFETEQMREAVKRTNG. . . . . KALLEVSGNVTDKTLREFAETGVDFIS
Query Conservation 
 


 

   


 
 

.............
   
 

 

     ..... 
 






    
   
  


 

Alig confidence 


















.............















.....


























Template Conservation           
 

  
 
 
  
  


  
 

  
  
 
   
          
 
 

     
  
 
 
 
   
Template Sequence  VTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRENDGRRVPVTLFTKGGGQWLEAMAETGCDALG
Template Known Secondary structure  TT
S
TTGGGS
TS
STT


TTTTTTTTS
S
Template Predicted Secondary structure 

























Template SS confidence 















































































   189190.........200.........210.........220.........230.........240.........250.........260........
 
   280.
Predicted Secondary structure 
Query SS confidence 

Query Sequence  VG
Query Conservation 

Alig confidence 

Template Conservation   
Template Sequence  LD
Template Known Secondary structure 

Template Predicted Secondary structure 
Template SS confidence 

   269270
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions