Job Description P30011 Confidence 45.49% Date Thu Jan 5 11:45:42 GMT 2012 Rank 406 Aligned Residues 90 % Identity 14% Template c2zwmA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcriptional regulatory protein yycf; PDBTitle: crystal structure of yycf receiver domain from bacillus2 subtilis Resolution 2.04 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.		.	.	230	.	.	.	.	.	.					.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure																																															.										.	.	.	.
Query SS confidence																																															.										.	.	.	.
Query Sequence		F	L	I	K	E	N	H	I	I	A	S	G	S	V	R	Q	A	V	E	K	A	S	W	L	H	P	D	A	P	V	E	V	E	V	E	N	L	E	E	L	D	E	A	L	K	.	A	G	A	D	I	I	M	L	D	.	.	.	.	N	F	E	T	E	Q	M	R	E	A	V	K	R	T	N	G	K	A	L	L	E
Query Conservation																																															.										.	.	.	.
Alig confidence																							.	.	.	.	.	.																			.										.	.	.	.
Template Conservation																							.	.	.	.	.	.
Template Sequence		I	L	V	V	D	D	E	K	P	I	A	D	I	L	E	F	N	L	R	K	E	.	.	.	.	.	.	G	Y	E	V	H	C	A	H	D	G	N	E	A	V	E	M	V	E	E	L	Q	P	D	L	I	L	L	D	I	M	L	P	N	K	D	G	V	E	V	C	R	E	V	R	K	K	Y	D	M	P	I	I	M
Template Known Secondary structure							S																.	.	.	.	.	.	T								S														S						T	T		S	S	S															S
Template Predicted Secondary structure																							.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.							.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	G	N	V	T	D	K	T	L	R	E	F	A	E	T	G	V	D	F	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	T	A	K	D	S	E	I	D	K	V	I	G	L	E	I	G	A	D	D	Y
Template Known Secondary structure					T	T											T	T
Template Predicted Secondary structure
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions