 |
Job Description | P30011 | Confidence | 97.69% | Date | Thu Jan 5 11:45:42 GMT 2012 |
Rank | 70 | Aligned Residues | 85 |
% Identity | 18% | Template | c2e77B_ |
PDB info |
PDB header:oxidoreductase | Chain: B: PDB Molecule:lactate oxidase; |
PDBTitle: crystal structure of l-lactate oxidase with pyruvate complex
|
Resolution | 1.90 Å |
|
 |
  |   |
198 | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
. | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | |
. | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
| . |
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
Query Sequence |   |
Q | A | V | E | K | A | S | W | L | H | P | D | A | P | V | E | V | E | V | E | N | L | E | E | L | D | E | A | L | K | A | G | A | D | I | I | M | L | D | N | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
F | E | T | E | Q | M | R | E | A | V | K | R | T | N | G | K | A | L | L | E | V | S | G | N | V | . |
T | D | K | T |
Query Conservation |   |
  |
|
|   |   |   |
|   |   |   |
|   |   |   |
|   |
|
|
|
|
|   |
|
|
|   |
|
|   |   |   |
|
|
|   |
|   |
|
|
| . | . | . | . | . | . | . | . | . | . |   |   |   |
|   |
|
|   |
|
|   |   |   |   |   |   |
|   |
|
|
|
|
|
|
| . |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
Template Conservation |   |
  |   |
|   |   |
|
|   |   |   |   |   |
|
|
|
|
|
|
|   |   |   |   |
|
|   |   |
|   |   |   |
|
|
|   |
|   |
|
|
|
|
|
|
|   |
|
|   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|
|   |   |   |
|   |
|
|   |
|
|
|
|
|   |
|   |
|
Template Sequence |   |
R | D | I | E | E | I | A | G | H | S | G | L | P | V | F | V | K | G | I | Q | H | P | E | D | A | D | M | A | I | K | R | G | A | S | G | I | W | V | S | N | H | G | A | R | Q | L | Y | E | A | P | G | S | F | D | T | L | P | A | I | A | E | R | V | N | K | R | V | P | I | V | F | D | S | G | V | R | R | G | E | H |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
| S |
|  |  |  |  |  |  |
| S |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |
|
| G | G | G | T | S | S | S | S |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | T | T | S | S |
|  |  |  |
| S | S |
|
| S |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1225 | . | . | . | . | 1230 | . | . | . | . | . | . | . | . | . | 1240 | . | . | . | . | . | . | . | . | . | 1250 | . | . | . | . | . | . | . | . | . | 1260 | . | . | . | . | . | . | . | . | . | 1270 | . | . | . | . | . | . | . | . | . | 1280 | . | . | . | . | . | . | . | . | . | 1290 | . | . | . | . | . | . | . | . | . | 1300 | . | . | . | . |
  |
  |   |
267 | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | R | E | F | A | E | T | G | V | D | F | I | S | V | G | A |
Query Conservation |   |
|   |   |   |
|   |   |
|
|
|   |
|
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|
|
|
|
|
|
|
|
|   |
|
|
|
Template Sequence |   |
V | A | K | A | L | A | S | G | A | D | V | V | A | L | G | R |
Template Known Secondary structure |   |
 |  |  |  |  |  | T | T |
| S |  |  |  |  |
|  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|  |  |  |  |
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1305 | . | . | . | . | 1310 | . | . | . | . | . | . | . | . | . | 1320 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|