Job Description P30011 Confidence 100.00% Date Thu Jan 5 11:45:42 GMT 2012 Rank 12 Aligned Residues 265 % Identity 16% Template c1ytkA_ PDB info PDB header:transferase Chain: A: PDB Molecule:nicotinate phosphoribosyltransferase from thermoplasma PDBTitle: crystal structure of a nicotinate phosphoribosyltransferase from2 thermoplasma acidophilum with nicotinate mononucleotide Resolution 2.65 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.					.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																							.	.	.	.
Query SS confidence																																																							.	.	.	.
Query Sequence		D	E	L	L	E	R	I	N	L	D	I	P	G	A	V	A	Q	A	L	R	E	D	L	G	G	T	V	D	A	N	N	D	I	T	A	K	L	L	P	E	N	S	R	S	H	A	T	V	I	T	R	E	N	.	.	.	.	G	V	F	C	G	K	R	W	V	E	E	V	F	I	Q	L	A	G	D	D	V	T	I
Query Conservation																																																							.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.																		.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.
Template Sequence		E	D	I	K	K	G	L	A	S	D	V	Y	F	E	R	T	I	S	A	I	G	D	K	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	D	L	R	V	A	M	E	A	T	V	S	G	P	L	D	T	W	I	N	F	T	G	L	D	E	V	L	K	L	L	E	G	L	D	.	.	.	V	D	L
Template Known Secondary structure						T	T		S	S												G	G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G											S			S	S															T	T	S	S	.	.	.
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.																.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.				.	70	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.							.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure																.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.
Query Sequence		I	W	H	V	D	D	G	D	V	I	N	A	N	Q	.	.	.	.	.	.	S	L	F	E	L	E	G	P	S	R	V	L	L	T	G	E	R	T	A	L	N	F	V	Q	T	L	S	G	V	A	S	K	V	R	H	Y	V	E	L	L	E	G	T	N	T	Q	L	L	D	T	R	K	T	L	P	G	L	R	S	A
Query Conservation																.	.	.	.	.	.
Alig confidence		.														.	.	.	.	.	.
Template Conservation		.
Template Sequence		.	Y	A	I	P	E	G	T	I	L	F	P	R	D	A	N	G	L	P	V	P	F	I	R	V	E	G	R	Y	C	D	F	G	M	Y	E	T	A	I	L	G	F	I	C	Q	A	S	G	I	S	T	K	A	S	K	V	R	L	A	A	G	D	S	P	F	F	S	F	G	I	R	R	M	H	P	A	I	S	P	M
Template Known Secondary structure		.					T	T					S	B		T	T	S		B														G	G	G																										T	T	S							G	G	G	S		G	G	G
Template Predicted Secondary structure		.
Template SS confidence
			72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		163	.	.	.	.	.	.	170	.	.	.	.	.								.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220					.	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.																																														.	.	.	.										.	.
Query SS confidence															.	.	.	.	.	.	.																																														.	.	.	.										.	.
Query Sequence		L	K	Y	A	V	L	C	G	G	G	A	N	H	.	.	.	.	.	.	.	R	L	G	L	S	D	A	F	L	I	K	E	N	H	I	I	A	S	G	S	V	R	Q	A	V	E	K	A	S	W	L	H	P	D	A	P	V	E	V	E	V	E	N	L	E	.	.	.	.	E	L	D	E	A	L	K	A	G	.	.
Query Conservation															.	.	.	.	.	.	.																																														.	.	.	.										.	.
Alig confidence															.	.	.	.	.	.	.																																														.	.	.	.										.	.
Template Conservation
Template Sequence		I	D	R	S	A	Y	I	G	G	A	D	G	V	S	G	I	L	G	A	K	L	I	D	Q	D	P	V	G	T	M	P	H	A	L	S	I	M	L	G	D	E	E	A	W	K	L	T	L	E	N	T	K	N	G	Q	K	S	V	L	L	I	D	T	Y	M	D	E	K	F	A	A	I	K	I	A	E	M	F	D	K
Template Known Secondary structure									T	T		S												T	S																										T			T	T	S								S	S	S											T	T		S
Template Predicted Secondary structure
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		230	.	.	.	.	.	.	.						.	.	240	.	.	.	.	.	.	.	.	.	250						.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.														.	.	.	.	.
Query SS confidence										.	.	.	.	.														.	.	.	.	.
Query Sequence		A	D	I	I	M	L	D	N	.	.	.	.	.	F	E	T	E	Q	M	R	E	A	V	K	R	T	.	.	.	.	.	N	G	K	A	L	L	E	V	S	G	N	V	T	D	K	T	L	R	E	F	A	E	T	G	V	D	F	I	S	V	G	A	L	T	K	H	V	Q	A	L	D	L	S	M	R	F
Query Conservation										.	.	.	.	.														.	.	.	.	.
Alig confidence										.	.	.	.	.														.	.	.	.	.
Template Conservation
Template Sequence		V	D	Y	I	R	L	D	T	P	S	S	R	R	G	N	F	E	A	L	I	R	E	V	R	W	E	L	A	L	R	G	R	S	D	I	K	I	M	V	S	G	G	L	D	E	N	T	V	K	K	L	R	E	A	G	A	E	A	F	G	V	G	T	S	I	S	S	A	K	P	F	D	F	A	M	D	I
Template Known Secondary structure											G	G	G		S																T	T		T	T	S						S	S													T												T
Template Predicted Secondary structure
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions