Job Description P30011 Confidence 99.95% Date Thu Jan 5 11:45:42 GMT 2012 Rank 21 Aligned Residues 246 % Identity 18% Template c1yirA_ PDB info PDB header:transferase Chain: A: PDB Molecule:nicotinate phosphoribosyltransferase 2; PDBTitle: crystal structure of a nicotinate phosphoribosyltransferase Resolution 2.10 Å

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		51	.	.	.	.	.	.	.	.	60	.	.	.					.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.																						.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure															.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	E	N	S	R	S	H	A	T	V	I	T	R	.	.	.	.	E	N	G	V	F	C	G	K	R	W	V	E	E	V	F	I	Q	L	A	G	D	D	V	T	I	I	W	H	V	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	G	D	V	I	N	A	N	Q	S	L	F
Query Conservation															.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	P	N	A	E	V	E	W	E	F	R	C	R	N	Q	E	D	L	R	L	Y	L	P	A	I	R	E	Q	L	E	Y	L	A	G	L	A	I	S	D	E	Q	L	A	F	L	E	R	I	P	F	L	A	P	D	F	I	R	F	L	G	L	F	R	F	N	P	R	Y	V	Q	T	G	I	E	N	D	E	F	F	L
Template Known Secondary structure			T	T										T	T					G	G	G																										T	S	T	T	S															G	G	G							T	T
Template Predicted Secondary structure
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.																					.	.	.	.	.	.	150	.	.	.	.	.	.					.	.	.	160	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.
Query Sequence		E	L	E	G	P	S	R	V	L	L	T	G	E	R	T	A	L	N	F	V	Q	T	L	S	G	V	A	S	K	V	R	H	Y	V	E	L	L	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	T	N	T	Q	L	L	D	T	R	K	T	L	.	.	.	.	P	G	L	R	S
Query Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.
Alig confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.
Template Conservation
Template Sequence		R	L	K	G	P	W	L	H	V	I	L	F	E	V	P	L	L	A	M	I	S	E	V	R	N	R	A	R	Y	P	A	A	T	V	E	Q	A	R	E	R	L	Q	E	K	F	D	W	L	R	R	E	A	S	A	E	E	L	A	G	F	K	M	A	D	F	G	T	R	R	R	F	S	Y	R	V	H	E	A	V	V
Template Known Secondary structure											G	G	G																		T	T		B																	T	T	S						T	T								S	T	T		S
Template Predicted Secondary structure
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.						180	.	.	.	.	.	.	.	.	.			190	.	.	.	.									.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.							220
Predicted Secondary structure																				.	.	.	.	.											.	.						.	.	.	.	.	.	.	.																										.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.											.	.						.	.	.	.	.	.	.	.																										.	.	.	.	.	.
Query Sequence		A	L	K	Y	A	V	L	C	G	G	G	A	N	H	R	L	G	L	.	.	.	.	.	S	D	A	F	L	I	K	E	N	H	.	.	I	I	A	S	G	.	.	.	.	.	.	.	.	S	V	R	Q	A	V	E	K	A	S	W	L	H	P	D	A	P	V	E	V	E	V	E	N	L	.	.	.	.	.	.	E
Query Conservation																				.	.	.	.	.											.	.						.	.	.	.	.	.	.	.																										.	.	.	.	.	.
Alig confidence																				.	.	.	.	.											.	.						.	.	.	.	.	.	.	.																										.	.	.	.	.	.
Template Conservation
Template Sequence		S	G	L	K	E	D	F	P	G	C	F	V	G	T	S	N	V	H	L	A	R	K	L	D	L	K	P	L	G	T	M	A	H	E	W	L	M	A	H	Q	Q	L	G	P	R	L	I	D	S	Q	S	A	A	L	D	C	W	V	R	E	Y	R	G	L	L	G	I	A	L	T	D	C	I	T	T	D	A	F	L	R
Template Known Secondary structure									S	S						S	B							T	T			B																S	S		G	G	G														T	T	S	S					S		S	S
Template Predicted Secondary structure
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.					.	.	.	.	.	.	.	.	250	.		.	.	.	.			.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.					.	.	.	.	.	.	.	.	280	.		.	.	.	.
Predicted Secondary structure																							.	.	.	.											.					.	.																	.	.	.	.											.					.	.	.
Query SS confidence																							.	.	.	.											.					.	.																	.	.	.	.											.					.	.	.
Query Sequence		E	L	D	E	A	L	K	A	G	A	D	I	I	M	L	D	N	F	E	T	E	.	.	.	.	Q	M	R	E	A	V	K	R	T	N	.	G	K	A	L	.	.	L	E	V	S	G	N	V	T	D	K	T	L	R	E	F	A	.	.	.	.	E	T	G	V	D	F	I	S	V	G	.	A	L	T	K	.	.	.
Query Conservation																							.	.	.	.											.					.	.																	.	.	.	.											.					.	.	.
Alig confidence																							.	.	.	.											.					.	.																	.	.	.	.											.					.	.	.
Template Conservation
Template Sequence		D	F	D	L	Y	F	A	K	L	F	D	G	L	R	H	D	S	G	D	P	L	L	W	A	E	K	T	I	A	H	Y	L	K	L	G	I	D	P	L	T	K	T	L	V	F	S	D	G	L	D	L	P	R	A	L	K	I	Y	R	A	L	Q	G	R	I	N	V	S	F	G	I	G	T	H	F	T	C	D	L	P
Template Known Secondary structure																		S	S																	T			G	G	G	S						S	S														T	T	T	S												S			T
Template Predicted Secondary structure
Template SS confidence
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.
		286	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	V	Q	A	L	D	L	S	M	R	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	V	E	P	M	N	I	V	V	K	M
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		354	.	.	.	.	.	360	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions