Job Description P30011 Confidence 38.10% Date Thu Jan 5 11:45:42 GMT 2012 Rank 431 Aligned Residues 125 % Identity 18% Template c1ydoC_ PDB info PDB header:lyase Chain: C: PDB Molecule:hmg-coa lyase; PDBTitle: crystal structure of the bacillis subtilis hmg-coa lyase, northeast2 structural genomics target sr181. Resolution 2.71 Å

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		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.												.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	V	R	H	Y	V	E	L	L	E	G	T	N	T	Q	L	L	D	.	.	.	.	.	.	.	.	.	.	.	T	R	K	T	L	P	G	L	R	S	A	L	K	Y	A	V	L	C	G	G	G	A	N	H	R	L	G	L	S	D	A	F	L	I	K	E	N	H	I	I	A	S	G	S	V	R	Q	A	V	E	K
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.																				.	.	.																		.	.	.	.	.
Template Conservation																																																		.	.	.																		.	.	.	.	.
Template Sequence		I	L	K	Q	V	N	N	D	A	Q	K	A	N	L	T	T	R	A	Y	L	S	T	V	F	G	C	P	Y	E	K	D	V	P	I	E	Q	V	I	R	L	S	E	A	L	F	E	F	G	.	.	.	I	S	E	L	S	L	G	D	T	I	G	A	A	N	P	A	Q	.	.	.	.	.	V	E	T	V	L	E	A
Template Known Secondary structure													T	T										T	T		B	T	T	T	B																		T	.	.	.		S							S	S								.	.	.	.	.
Template Predicted Secondary structure																																																		.	.	.																		.	.	.	.	.
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170				.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.						.	.	190	.	.	.	.
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.						.	220	.	.	.	.	.	.	.	.	.	230	.	.	.																.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure																		.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	S	W	L	H	P	D	A	P	V	E	V	E	V	E	N	.	.	.	.	.	L	E	E	L	D	E	A	L	K	A	G	A	D	I	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	L	D	N	F	E	T	E	Q	M	R	E	A	V	K	R	T	N	G	K	A	L	L	E	V	S	G	N	V
Query Conservation																		.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.	.
Template Sequence		L	L	A	R	F	P	A	N	Q	I	A	L	H	F	H	D	T	R	G	T	A	L	A	N	X	V	T	A	L	Q	X	G	I	T	V	F	D	G	S	A	G	G	L	G	G	C	P	Y	A	P	G	S	S	G	N	A	A	T	E	D	I	V	Y	X	L	E	Q	X	D	I	K	.	.	.	.	.	.	T	N	V
Template Known Secondary structure				T	T	S		G	G	G						B	G	G	G	S													T							B	G	G	G					T	T							B		B											T	T		B	.	.	.	.	.	.
Template Predicted Secondary structure																																																																									.	.	.	.	.	.
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.							.	.	.
		263	.	.	.	.	.	.	270	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	D	K	T	L	R	E	F	A	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	L	E	K	L	L	S	A	A	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		269	270	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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