Job Description P30011 Confidence 47.70% Date Thu Jan 5 11:45:42 GMT 2012 Rank 390 Aligned Residues 148 % Identity 11% Template c1ydnA_ PDB info PDB header:lyase Chain: A: PDB Molecule:hydroxymethylglutaryl-coa lyase; PDBTitle: crystal structure of the hmg-coa lyase from brucella melitensis,2 northeast structural genomics target lr35. Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	R	H	Y	V	E	L	L	E	G	T	N	T	Q	L	L	D	T	R	K	T	L	P	G	L	R	S	A	L	K	Y	A	V	L	C	G	G	G	A	N	H	R	L	G	L	S	D	A	F	L	I	K	E	N	H	I	I	A	S	G	S	V	R	Q	A	V	E	K	A	S	W	L	H	P	D	A	P	V	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	R	E	V	X	A	G	I	R	R	A	D	G	V	R	Y	S	V	L	V	P	N	X	K	G	Y	E	A	A	A	A	A	H	A	D	E	I	A	V	F	I	S	A	S	E	G	F	S	K	A	N	I	N	C	T	I	A	E	S	I	E	R	L	S	P	V	I	G	A	A	I	N	D	G	L	A	I	R	G	Y
Template Known Secondary structure									S				S	S	S							S	S										T	T		S								S									T	S	S																			T	T
Template Predicted Secondary structure
Template SS confidence
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
		214	.	.														.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.					.	.	.	240	.	.	.	.	.	.	.	.	.	250	.				.	.	.	.	.	.	.	.	260					.	.	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.																.	.	.										.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.																.	.	.										.	.	.	.
Query Sequence		V	E	V	.	.	.	.	.	.	.	.	.	.	.	.	.	E	N	L	E	E	L	D	E	A	L	K	A	G	A	D	I	I	M	L	D	.	.	.	.	N	F	E	T	E	Q	M	R	E	A	V	K	R	T	N	.	.	.	G	K	A	L	L	E	V	S	G	.	.	.	.	N	V	T	D	K	T	L	R	E
Query Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.																.	.	.										.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.																.	.	.										.	.	.	.
Template Conservation
Template Sequence		V	S	C	V	V	E	C	P	Y	D	G	P	V	T	P	Q	A	V	A	S	V	T	E	Q	L	F	S	L	G	C	H	E	V	S	L	G	D	T	I	G	R	G	T	P	D	T	V	A	A	X	L	D	A	V	L	A	I	A	P	A	H	S	L	A	G	H	Y	H	D	T	G	G	R	A	L	D	N	I	R	V
Template Known Secondary structure					S	S			T	T	T																			T		S							T	T	S																T	T	S		G	G	G						B		T	T	S
Template Predicted Secondary structure
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
		270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	A	E	T	G	V	D	F	I	S	V	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	L	E	K	G	L	R	V	F	D	A	S
Template Known Secondary structure						T							B
Template Predicted Secondary structure
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions