Job Description P30011 Confidence 99.87% Date Thu Jan 5 11:45:42 GMT 2012 Rank 29 Aligned Residues 265 % Identity 12% Template c1ybeA_ PDB info PDB header:transferase Chain: A: PDB Molecule:nicotinate phosphoribosyltransferase; PDBTitle: crystal structure of a nicotinate phosphoribosyltransferase Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																		.
Query SS confidence																																		.
Query Sequence		P	R	R	Y	N	P	D	T	R	R	D	E	L	L	E	R	I	N	L	D	I	P	G	A	V	A	Q	A	L	R	E	D	.	L	G	G	T	V	D	A	N	N	D	I	T	A	K	L	L	P	E	N	S	R	S	H	A	T	V	I	T	R	E	N	G	V	F	C	G	K	R	W	V	E	E	V	F	I	Q	L
Query Conservation																																		.
Alig confidence																																		.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	R	T	K	T	V	R	L	A	E	E	I	D	E	M	E	L	R	E	Q	L	D	H	A	R	T	L	R	L	S	K	K	E	N	I	W	L	A	G	N	T	F	Y	G	R	S	Q	I	F	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	E	F	L	S	W	L
Template Known Secondary structure			S			S	S		S	T	T	T	S													T	T														S		S	S	S		S			S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.																								110	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.																							.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	G	D	D	V	T	I	I	W	H	V	D	D	G	D	V	I	N	A	N	Q	S	L	F	E	L	E	G	P	S	R	V	L	L	T	G	E	R	T	A	L	N	F	V	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	L	S	G	V	A	S	K	V	R	H	Y	V
Query Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.
Template Sequence		S	S	Y	Q	L	P	E	Y	E	L	F	.	.	.	.	.	K	R	D	G	Q	Y	E	L	N	F	H	G	R	W	M	D	T	T	L	W	E	I	P	A	L	S	I	I	N	E	L	R	S	R	S	A	M	R	S	L	G	Y	F	T	L	D	V	L	Y	A	R	A	K	A	K	M	W	E	K	V	E	R	L	R
Template Known Secondary structure			T										.	.	.	.	.			S	S								S	B					G	G	G																		T	S																									T
Template Predicted Secondary structure													.	.	.	.	.
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.						.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.					.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.						.	.	.	.	.	.	.			190	.	.	.	.												.	.	.
Predicted Secondary structure																			.	.	.	.																											.	.	.	.	.								.	.						.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.																											.	.	.	.	.								.	.						.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	L	L	E	G	T	N	T	Q	L	L	D	T	R	K	T	L	.	.	.	.	P	G	L	R	S	A	L	K	Y	A	V	L	C	G	G	G	A	N	H	R	L	G	L	S	D	A	.	.	.	.	.	F	L	I	K	E	N	H	.	.	I	I	A	S	G	.	.	.	.	.	.	.	.	.	.	.	S	V	R
Query Conservation																			.	.	.	.																											.	.	.	.	.								.	.						.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.																.	.	.	.																											.	.	.	.	.								.	.						.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.
Template Sequence		E	.	L	P	G	L	R	I	S	D	F	G	T	R	R	R	H	S	F	L	W	Q	R	W	C	V	E	A	L	K	E	G	I	G	P	A	F	T	G	T	S	N	V	L	L	A	M	D	S	D	L	E	A	V	G	T	N	A	H	E	L	P	M	V	V	A	A	L	A	Q	T	N	E	E	L	A	A	A	P	Y
Template Known Secondary structure		T	.		T	T								T	T	T		S																	G	G	G					S	B								T			B						T												S
Template Predicted Secondary structure			.
Template SS confidence
		192		.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.			220	.	.	.	.	.	.	.				.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250								.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure																								.	.									.	.	.																								.	.	.	.	.	.	.
Query SS confidence																								.	.									.	.	.																								.	.	.	.	.	.	.
Query Sequence		Q	A	V	E	K	A	S	W	L	H	P	D	A	P	V	E	V	E	V	E	N	L	.	.	E	E	L	D	E	A	L	K	.	.	.	A	G	A	D	I	I	M	L	D	N	F	E	T	E	Q	M	R	E	A	V	K	R	T	.	.	.	.	.	.	.	N	G	K	A	L	L	E	V	S	G	N	V	T	D	K
Query Conservation																								.	.									.	.	.																								.	.	.	.	.	.	.
Alig confidence																								.	.									.	.	.																								.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	V	L	K	D	W	N	R	L	Y	G	G	N	L	L	I	V	L	P	D	A	F	G	T	A	A	F	L	R	N	A	P	E	W	V	A	D	W	T	G	F	R	P	D	S	A	P	P	I	E	G	G	E	K	I	I	E	W	W	R	K	M	G	R	D	P	R	T	K	M	L	I	F	S	D	G	L	D	V	D
Template Known Secondary structure													G	G	G							T	T								T			G	G	G	G	G	S	S						S	S																T	T			G	G	G	S						T	T
Template Predicted Secondary structure
Template SS confidence
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
		266	.	.	.	270	.	.			.	.			.	.	.	.	.	280	.								.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure									.	.			.	.								.	.	.	.	.	.	.
Query SS confidence									.	.			.	.								.	.	.	.	.	.	.
Query Sequence		T	L	R	E	F	A	E	.	.	T	G	.	.	V	D	F	I	S	V	G	.	.	.	.	.	.	.	A	L	T	K	H	V	Q	A	L	D	L	S	M	R	F
Query Conservation									.	.			.	.								.	.	.	.	.	.	.
Alig confidence									.	.			.	.								.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	I	V	D	T	Y	R	H	F	E	G	R	V	R	M	S	F	G	W	G	T	N	L	T	N	D	F	A	G	C	A	P	L	K	P	I	S	I	V	C	K	V
Template Known Secondary structure											T	T	T	S															T	T
Template Predicted Secondary structure
Template SS confidence
		351	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions