Return to main results Retrieve Phyre Job Id

Job DescriptionP30011
Confidence34.54%DateThu Jan 5 11:45:42 GMT 2012
Rank443Aligned Residues95
% Identity20%Templatec1rnlA_
PDB info PDB header:signal transduction proteinChain: A: PDB Molecule:nitrate/nitrite response regulator protein narl; PDBTitle: the nitrate/nitrite response regulator protein narl from narl
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   182.......190.........200.........210.........220....... ..230.........240. ........250.....
Predicted Secondary structure 













.







.....



Query SS confidence 













































.













. . . . .













Query Sequence  AFLIKENHIIASGSVRQAVEKASWLHPDAPVEVEVENLEELDEALK. AGADIIMLDNFETE. . . . . QMREAVKRTNGKAL
Query Conservation   







   
    

   
   
   
 




 


 

  . 


 
 


   
..... 

 

      
 
Alig confidence 


















....






















.













.....













Template Conservation   





       
   
....        
  
    


       






  
    
                
Template Sequence  TILLIDDHPMLRTGVKQLI. . . . SMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGLETLDKLREKSLSGRI
Template Known Secondary structure 
S
....T
TTSS

STT
GGG
TTS


S
Template Predicted Secondary structure 


....


























Template SS confidence 















































































   8.10.........20...... ...30.........40.........50.........60.........70.........80...
 
   256...260.........270.........280
Predicted Secondary structure 







Query SS confidence 
























Query Sequence  LEVSGNVTDKTLREFAETGVDFISV
Query Conservation 






    
   
  


 


Alig confidence 
























Template Conservation                           
Template Sequence  VVFSVSNHEEDVVTALKRGADGYLL
Template Known Secondary structure 
S
S
TT
S
Template Predicted Secondary structure 




















Template SS confidence 
























   84.....90.........100........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions