|   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
|
|
|
|
|  |  |  |
|
|  |  |
|
|
|
|  |  |  |  |  |  |
|  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | T | G | M | T | N | V | T | K | L | A | S | E | P | S | G | Q | E | F | L | V | F | T | L | G | D | E | E | Y | G | I | D | I | L | K | V | Q | E | I | R | G | Y | D | Q | V | T | R | I | A | N | T | P | A | F | I | K | G | V | T | N | L | R | G | V | I | V | P | I | V | D | L | R | I | K | F | S | Q | V | D | V |
Query Conservation |   |
  |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|
|   |   |   |   |
|
|
|   |   |   |
|   |
|
|   |   |   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |
|   |   |   |   |
|
|   |   |
|
|
|
|
|
|   |   |   |
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|
|   |   |   |   |
|
|
|   |   |   |
|   |
|
|   |   |   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |
|   |   |   |   |
|
|   |   |
|
|
|
|
|
|   |   |   |
|   |   |   |   |   |
Template Sequence |   |
M | T | G | M | T | N | V | T | K | L | A | S | E | P | S | G | Q | E | F | L | V | F | T | L | G | D | E | E | Y | G | I | D | I | L | K | V | Q | E | I | R | G | Y | D | Q | V | T | R | I | A | N | T | P | A | F | I | K | G | V | T | N | L | R | G | V | I | V | P | I | V | D | L | R | I | K | F | S | Q | V | D | V |
Template Known Secondary structure |   |
|
| S | S |
|
|
|
|
| S | S | S | S |
|
|
|  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  | G | G | G |  |  |  |  |  |  | S | T | T |
| B |
|
| T | T | S |
| T | T |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |
|  |  |  |  |  |
|
| S |
|
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
|
|
|
|
|  |  |  |
|
|  |  |
|
|
|
|  |  |  |  |  |  |
|  |  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
  |
  |   |
81 | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | Y | N | D | N | T | V | V | I | V | L | N | L | G | Q | R | V | V | G | I | V | V | D | G | V | S | D | V | L | S | L | T | A | E | Q | I | R | P | A | P | E | F | A | V | T | L | S | T | E | Y | L | T | G | L | G | A | L | G | D | R | M | L | I | L | V | N | I | E | K | L | L | N | S | E | E | M | A | L | L | D |
Query Conservation |   |
  |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |
|
|   |
|
|   |
|   |   |
|   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |
|   |
|
|
|   |   |   |
|
|   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |
|
|   |
|
|   |
|   |   |
|   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |
|   |
|
|
|   |   |   |
|
|   |   |   |   |   |   |   |   |   |
Template Sequence |   |
D | Y | N | D | N | T | V | V | I | V | L | N | L | G | Q | R | V | V | G | I | V | V | D | G | V | S | D | V | L | S | L | T | A | E | Q | I | R | P | A | P | E | F | A | V | T | L | S | T | E | Y | L | T | G | L | G | A | L | G | D | R | M | L | I | L | V | N | I | E | K | L | L | N | S | E | E | M | A | L | L | D |
Template Known Secondary structure |   |
| T | T | T | S |
|  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  | S |  |  |  |  |  |  |  |  |
| T | T | T | S |
|
|
|
|
| S | S | S | S |
|
| G | G | G |
|
|  |  |  |  |  | T | T |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  | G | G |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
81 | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 |
  |
  |   |
161 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
Query Sequence |   |
S | A | A | S | E | V | A |
Query Conservation |   |
  |   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |   |
Template Sequence |   |
S | A | A | S | E | V | A |
Template Known Secondary structure |   |
G | T | S | S | T | T |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
  |   |
161 | . | . | . | . | . | . |
  |