Job Description P45545 Confidence 99.93% Date Thu Jan 5 12:03:04 GMT 2012 Rank 152 Aligned Residues 300 % Identity 18% Template d2v1pa1 SCOP info PLP-dependent transferase-like PLP-dependent transferases Beta-eliminating lyases Resolution 1.9

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		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.									.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.	.	.
Query Sequence		G	L	N	Q	P	R	V	T	Q	R	V	E	Q	V	L	A	D	A	F	H	A	Q	A	A	A	L	V	Q	G	A	G	T	G	A	I	R	A	G	L	A	A	L	L	K	P	G	Q	.	.	.	.	.	.	.	.	R	L	L	V	H	D	A	P	V	Y	P	T	T	R	V	I	I	E	Q	M	G	L	T	L	I
Query Conservation																																																	.	.	.	.	.	.	.	.
Alig confidence																								.																									.	.	.	.	.	.	.	.
Template Conservation																								.
Template Sequence		A	F	S	G	S	R	S	Y	Y	A	L	A	E	S	V	K	N	I	F	G	Y	Q	.	Y	T	I	P	T	H	Q	G	R	G	A	E	Q	I	Y	I	P	V	L	I	K	K	R	E	Q	E	K	G	L	D	R	S	K	M	V	A	F	S	N	Y	F	F	D	T	T	Q	G	H	S	Q	I	N	G	C	T	V	R
Template Known Secondary structure			S	S	S															T			S	.							S	S	T	T	T																				T	T	T						S	S												T	T
Template Predicted Secondary structure																								.
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.		.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		117	.	.	120	.																.	.	.	.	.	.	.	.	130	.	.	.				.	.	.	.	.	.	140	.	.	.	.	.	.	.	.					.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.																.	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.																.	.	.	.
Query Sequence		T	V	D	F	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	L	S	A	L	K	Q	V	V	D	E	Q	.	.	.	Q	P	D	A	A	L	V	Q	H	T	R	Q	Q	P	Q	.	.	.	.	D	S	Y	V	L	A	D	V	L	A	T	L	R	A	A	G	V	P	A	L	T	D	D	N	Y	A
Query Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.																.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.																.	.	.	.
Template Conservation
Template Sequence		N	V	Y	I	K	E	A	F	D	T	G	V	R	Y	D	F	K	G	N	F	D	L	E	G	L	E	R	G	I	E	E	V	G	P	N	N	V	P	Y	I	V	A	T	I	T	S	N	S	A	G	G	Q	P	V	S	L	A	N	L	K	A	M	Y	S	I	A	K	K	Y	D	I	P	V	V	M	D	S	A	R	F
Template Known Secondary structure				B		T	T	T	T		T	T	S			T	T	T	T		B														G	G	G								S	S	B		G	G	G		B																	T	T								T	T
Template Predicted Secondary structure
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		175	.	.	.	.	180	.	.	.	.	.	.																		.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.		.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.								.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.																			.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.																			.	.	.	.	.	.	.
Query Sequence		V	M	K	V	A	R	I	G	C	E	C	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	N	V	S	T	F	S	C	F	K	L	F	G	P	E	G	V	G	A	V	.	V	G	D	A	D	V	I	N	R	I	R	A	T	L	Y	S	G	G	.	.	.	.	.	.	.	S	Q	I	Q	G
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.																			.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.																			.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	E	N	A	Y	F	I	K	Q	R	E	A	E	Y	K	D	W	T	I	E	Q	I	T	R	E	T	Y	K	Y	A	D	M	L	A	M	S	A	K	K	D	A	M	V	P	M	G	G	L	L	C	M	K	D	D	S	F	F	D	V	Y	T	E	C	R	T	L	V	V	Q	E	G	F	P	T	Y	G	G	L	E	G
Template Known Secondary structure													G	G	G	T	T	S										G	G	G		S						S	S	S	T	T			S	S								S	G	G	G													T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
		230	.	.	.	.	.	.	.	.	.	240	.	.			.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.											.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure															.	.																																											.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.																																											.	.	.	.	.	.	.	.	.	.
Query Sequence		A	Q	A	L	E	V	L	R	G	L	V	F	A	.	.	P	V	M	H	A	V	Q	A	G	V	S	E	R	L	L	A	L	L	N	G	G	A	V	P	E	V	K	S	A	V	I	A	N	A	Q	S	K	V	L	I	V	E	.	.	.	.	.	.	.	.	.	.	F	H	Q	P	I	A	A	R	V	L	E	E	A
Query Conservation															.	.																																											.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.																												.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.
Template Sequence		G	A	M	E	R	L	A	V	G	L	Y	D	G	M	N	L	D	W	L	A	Y	R	I	A	Q	V	Q	Y	L	V	D	G	L	E	E	I	G	V	V	Q	Q	A	.	.	.	.	.	.	.	G	G	H	A	A	F	V	D	A	G	K	L	L	P	H	I	P	A	D	Q	F	P	A	Q	A	L	A	C	E	L	Y
Template Known Secondary structure														T	T																						T	T						.	.	.	.	.	.	.		S	S										S	T	T	S		G	G	G
Template Predicted Secondary structure																																												.	.	.	.	.	.	.
Template SS confidence
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.								.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.		.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
Predicted Secondary structure																																																			.
Query SS confidence																																																			.
Query Sequence		Q	K	R	G	A	L	P	Y	P	V	G	A	E	S	K	Y	E	I	P	P	L	F	Y	R	L	S	G	T	F	R	Q	A	N	P	Q	S	E	H	C	A	I	R	I	N	P	N	R	S	G	.	E	E	T	V	L	R	I	L	R	E	S	I	A	S	I
Query Conservation																																																			.
Alig confidence																					.	.	.	.	.	.	.	.	.																						.
Template Conservation																					.	.	.	.	.	.	.	.	.
Template Sequence		K	V	A	G	I	R	A	V	E	I	G	S	F	L	L	G	R	D	P	.	.	.	.	.	.	.	.	.	K	T	G	K	Q	L	P	C	P	A	E	L	L	R	L	T	I	P	R	A	T	Y	T	Q	T	H	M	D	F	I	I	E	A	F	K	H	V
Template Known Secondary structure												S						B		T	.	.	.	.	.	.	.	.	.	T	T		S	B				S										T	T	T
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.
Template SS confidence
		387	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.										.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions