Phyre 2 alignment of P45545 with d2e7ja1

Job Description P45545
Confidence 99.93% Date Thu Jan 5 12:03:04 GMT 2012

Rank 155 Aligned Residues 285

% Identity 14% Template d2e7ja1

SCOP info PLP-dependent transferase-like PLP-dependent transferases SepSecS-like

Resolution 2.40

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure																																																																											.	.	.	.	.	.
Query SS confidence																																																																											.	.	.	.	.	.
Query Sequence	P	R	V	T	Q	R	V	E	Q	V	L	A	D	A	F	H	A	Q	A	A	A	L	V	Q	G	A	G	T	G	A	I	R	A	G	L	A	A	L	L	K	P	G	Q	R	L	L	V	H	D	A	P	V	Y	P	T	T	R	V	I	I	E	Q	M	G	L	T	L	I	T	V	D	F	N	D	.	.	.	.	.	.
Query Conservation																																																																											.	.	.	.	.	.
Alig confidence																			.																													.																											.	.	.	.	.	.
Template Conservation																			.																													.
Template Sequence	P	P	I	H	D	F	I	H	N	Q	L	P	K	F	L	G	C	D	.	V	A	R	V	T	N	G	A	R	E	A	K	F	A	V	M	H	S	L	A	K	K	D	A	W	V	V	M	.	D	E	N	C	H	Y	S	S	Y	V	A	A	E	R	A	G	L	N	I	A	L	V	P	K	T	D	Y	P	D	Y	A	I
Template Known Secondary structure									T						T	T	S	S	.						S	S															T	T						.		T	T												T	T											T	T	T
Template Predicted Secondary structure																			.																													.
Template SS confidence
	53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70		.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130

						123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure	.	.	.	.	.
Query SS confidence	.	.	.	.	.
Query Sequence	.	.	.	.	.	L	S	A	L	K	Q	V	V	D	E	Q	Q	P	D	A	A	L	V	Q	H	T	R	Q	Q	P	Q	D	S	Y	V	L	A	D	V	L	A	T	L	R	A	A	G	V	P	A	L	T	D	D	N	Y	A	V	M	K	V	A	R	I	G	C	E	C	G	A	N	V	S	T	F	S	C	F	K	L
Query Conservation	.	.	.	.	.
Alig confidence	.	.	.	.	.
Template Conservation
Template Sequence	T	P	E	N	F	A	Q	T	I	E	E	T	K	K	R	G	E	V	V	L	A	L	I	T	Y	P	D	G	N	Y	G	N	L	P	D	V	K	K	I	A	K	V	C	S	E	Y	D	V	P	L	L	V	N	G	A	Y	A	I	G	R	M	P	V	S	L	K	E	I	G	A	D	F	I	V	G	S	G	H	K	S
Template Known Secondary structure													T	T	T	S									S	S		T	T	T															T	T	T								T	T	T	B	T	T	B								T		S
Template Predicted Secondary structure
Template SS confidence
	131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210

	198	.	200	.	.		.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.									.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure						.																									.	.	.	.	.	.	.	.
Query SS confidence						.																									.	.	.	.	.	.	.	.
Query Sequence	F	G	P	E	G	.	V	G	A	V	V	G	D	A	D	V	I	N	R	I	R	A	T	L	Y	S	G	G	S	Q	.	.	.	.	.	.	.	.	I	Q	G	A	Q	A	L	E	V	L	R	G	L	V	F	A	P	V	M	H	A	V	Q	A	G	V	S	E	R	L	L	A	L	L	N	G	G	A	V	P	E	V
Query Conservation						.																									.	.	.	.	.	.	.	.
Alig confidence						.																									.	.	.	.	.	.	.	.
Template Conservation
Template Sequence	M	A	A	S	G	P	I	G	V	M	G	M	K	E	E	W	A	E	I	V	L	R	R	S	E	K	Y	K	N	K	E	V	E	L	L	G	C	T	A	R	G	A	T	I	I	T	L	M	A	S	F	P	H	V	R	E	R	I	K	R	W	D	E	E	V	E	K	A	R	R	F	A	A	E	M	E	K	L	G	I
Template Known Secondary structure	S	S			S	S								T	T	T	T	T	T	T	T		B		S	S		T	T	S	B	G	G	G	T	T					S																	G	G	G																		T	T
Template Predicted Secondary structure
Template SS confidence
	211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290

	269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.										.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.
Query Sequence	K	S	A	V	I	A	N	A	Q	S	K	V	L	I	V	E	F	H	Q	P	I	A	A	.	.	.	.	.	.	.	.	.	R	V	L	E	E	A	Q	K	R	G	A	L	P	Y	P	V	G	A	E	S	K	Y	E	I	P	P	L	F	Y	R	L	S	G	T	F	R	Q	A	N	P	Q	S	E	H	C	A	I	R
Query Conservation																								.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence	K	Q	L	G	D	N	P	H	N	H	D	L	M	F	F	H	A	E	V	L	Y	E	I	S	K	K	A	K	G	G	R	F	F	L	Y	R	E	L	K	S	R	K	I	H	G	I	K	P	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	R	Y	F	K
Template Known Secondary structure				S	S	S	S			S	S																S	S	S	G	G	G									T	T				S		T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
	291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340																										.	.	.	.	.

	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
Predicted Secondary structure
Query SS confidence
Query Sequence	I	N	P	N	R	S	G	E	E	T	V	L	R	I	L	R	E	S	I	A	S	I
Query Conservation
Alig confidence				.
Template Conservation				.
Template Sequence	L	S	T	.	Y	G	L	S	D	E	E	V	D	Y	V	L	N	A	F	K	E	I
Template Known Secondary structure				.	T	T
Template Predicted Secondary structure				.
Template SS confidence
	346	.	.		.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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