Job Description P45545 Confidence 100.00% Date Thu Jan 5 12:03:04 GMT 2012 Rank 2 Aligned Residues 351 % Identity 17% Template d2ctza1 SCOP info PLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like Resolution 2.60

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	T	F	P	L	Q	S	L	T	I	I	E	A	Q	Q	K	Q	F	A	L	V	D	S	I	C	R	H	F	P	G	S	E	F	L	T	G	G	D	L	G	L	T	P	G	L	N	Q	P	R	V	T	Q	R	V	E	Q	V	L	A	D	A	F	H	A	Q	A	A	A	L	V	Q	G	A	G	T	G	A	I	R	A
Query Conservation
Alig confidence																																		.	.	.	.	.	.																												.
Template Conservation																																		.	.	.	.	.	.																												.
Template Sequence		P	T	T	L	S	R	Q	V	P	I	Y	P	T	T	S	Y	V	F	K	S	P	E	H	A	A	N	L	F	A	L	K	E	.	.	.	.	.	.	F	G	N	I	Y	S	R	I	M	N	P	T	V	D	V	L	E	K	R	L	A	A	L	E	G	G	K	.	A	A	L	A	T	A	S	G	H	A	A	Q	F	L
Template Known Secondary structure		T	T	T			S	S							S					S										T	T	T	T	.	.	.	.	.	.	G	G	G	S		B	T	T	B																T		S	.						S	S
Template Predicted Secondary structure																																		.	.	.	.	.	.																												.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.							.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.		.	.	.	.	.	80	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.				.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.
Query SS confidence																												.	.	.
Query Sequence		G	L	A	A	L	L	K	P	G	Q	R	L	L	V	H	D	A	P	V	Y	P	T	T	R	V	I	.	.	.	I	E	Q	M	G	L	T	L	I	T	V	D	F	N	D	L	S	A	L	K	Q	V	V	D	E	Q	Q	P	D	A	A	L	V	Q	H	T	R	Q	Q	P	Q	D	S	Y	V	L	A	D	V	L	A
Query Conservation																												.	.	.
Alig confidence																												.	.	.
Template Conservation
Template Sequence		A	L	T	T	L	A	Q	A	G	D	N	I	V	S	T	P	N	L	Y	G	G	T	F	N	Q	F	K	V	T	L	K	R	L	G	I	E	V	R	F	T	S	R	E	E	R	P	E	E	F	L	A	L	T	D	E	K	T	R	A	W	W	V	E	S	I	G	N	P	A	L	N	I	P	D	L	E	A	L	A	Q
Template Known Secondary structure									T	T							S												T					T	T								T	T												T	T								S	S		T	T	T
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.				.	.	.	.	.	.	.
Predicted Secondary structure																																														.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																														.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	L	R	A	A	G	V	P	A	L	T	D	D	N	Y	A	V	M	K	V	A	R	I	G	C	E	C	G	A	N	V	S	T	F	S	C	F	K	L	F	G	P	E	G	.	.	.	V	G	A	V	V	G	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																														.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																														.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	A	R	E	K	G	V	A	L	I	V	D	N	T	F	G	M	G	G	Y	L	L	R	P	L	A	W	G	A	A	L	V	T	H	S	L	T	K	W	V	G	G	H	G	A	V	I	A	G	A	I	V	D	G	G	N	F	P	W	E	G	G	R	Y	P	L	L	T	E	P	Q	P	G	Y	H	G	L	R	L	T
Template Known Secondary structure							T								G	G	G	G	G	G	T	S			G	G	G	G	T		S						T	T	T	T	T	T		S	S											S		S			T	T	T	T						S		B	G	G	G	T	T	B
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
								210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.										.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.																																																							.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.																																																							.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	A	D	V	I	N	R	I	R	A	T	L	Y	S	G	G	S	Q	I	Q	G	A	Q	A	L	E	V	L	R	G	L	V	F	A	P	V	M	H	A	V	Q	A	G	V	S	E	R	L	L	A	L	L	N	G	G	.	.	.	.	.	.	.	.	.	A	V	P	E	V	K	S	A	V	I	A
Query Conservation		.	.	.	.	.	.																																																							.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																																																							.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	A	F	G	E	L	A	F	I	V	K	A	R	V	D	G	L	R	D	Q	G	Q	A	L	G	P	F	E	A	W	V	V	L	L	G	M	E	T	L	S	L	R	A	E	R	H	V	E	N	T	L	H	L	A	H	W	L	L	E	Q	P	Q	V	A	W	V	N	Y	P	G	L	P	H	H	P	H	H	D	R	A
Template Known Secondary structure					G	G	G									T																						T	T																					T		T	T							T	T	S	T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
		275	.						.	.	.	280	.	.	.	.	.	.	.			.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.		.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.												.	.																																													.
Query SS confidence				.	.	.	.	.												.	.																																													.
Query Sequence		N	A	.	.	.	.	.	Q	S	K	V	L	I	V	E	F	H	Q	.	.	P	I	A	A	R	V	L	E	E	A	Q	K	R	G	A	L	P	Y	P	V	G	A	E	S	K	Y	E	I	P	P	L	F	Y	R	L	S	G	T	F	R	Q	A	N	P	.	Q	S	E	H	C	A	I	R	I	N	P	N	R	S	G
Query Conservation				.	.	.	.	.												.	.																																													.
Alig confidence				.	.	.	.	.												.	.																																													.
Template Conservation
Template Sequence		Q	K	Y	F	K	G	K	P	G	A	V	L	T	F	G	L	K	G	G	Y	E	A	A	K	R	F	I	S	R	L	K	L	I	S	H	L	A	N	V	G	D	T	R	T	L	A	I	H	P	A	S	T	T	H	S	Q	L	S	P	E	E	Q	A	Q	A	G	V	S	P	E	M	V	R	L	S	V	G	L	E	H
Template Known Secondary structure						T	T				S							T	T											T		S	S	S				S					S	S						G	G	G	T	T	T	T	T	S									T			T	T								S	S
Template Predicted Secondary structure
Template SS confidence
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.
		347	.	.	350	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	T	V	L	R	I	L	R	E	S	I	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	E	D	L	K	A	E	L	K	E	A	L	A
Template Known Secondary structure													T
Template Predicted Secondary structure
Template SS confidence
		409	410	.	.	.	.	.	.	.	.	.	420	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions