Job Description P45545 Confidence 99.87% Date Thu Jan 5 12:03:04 GMT 2012 Rank 209 Aligned Residues 306 % Identity 14% Template d1pmma_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Pyridoxal-dependent decarboxylase Resolution 2.00

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		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.					.	60	.	.	.	.	.	.	.	.							.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.													.	.	.
Predicted Secondary structure																													.	.	.	.											.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.											.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	E	F	L	T	G	G	D	L	G	L	T	P	G	L	N	Q	P	R	V	T	Q	R	V	E	Q	V	.	.	.	.	L	A	D	A	F	H	A	Q	A	A	.	.	.	.	.	.	A	L	V	Q	G	A	G	T	G	A	I	R	A	G	L	A	A	L	.	.	.	.	.	.	.	.	.	.	.	.	L	K	P
Query Conservation																													.	.	.	.											.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.	.	.											.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	K	L	M	D	L	S	I	N	K	N	W	I	D	K	E	E	Y	P	Q	S	A	A	I	D	L	R	C	V	N	M	V	A	D	L	W	H	A	P	A	P	K	N	G	Q	A	V	G	T	N	T	I	G	S	S	E	A	C	M	L	G	G	M	A	M	K	W	R	W	R	K	R	M	E	A	A	G	K	P	T
Template Known Secondary structure								T	T	T		B	T	T		T	T	T	S																		T	T					T	T	S			S					S	S																								T
Template Predicted Secondary structure
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.							.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.
Query Sequence		G	Q	R	L	L	V	H	D	A	P	V	Y	P	T	T	R	V	I	I	E	Q	M	G	L	T	L	I	T	V	D	F	N	.	.	.	.	.	.	D	L	S	A	L	K	Q	V	V	D	E	Q	Q	P	D	A	A	L	V	Q	H	T	R	Q	Q	P	Q	D	S	Y	V	L	A	D	V	L	A	T	L	R	A	A
Query Conservation																																		.	.	.	.	.	.
Alig confidence																		.																.	.	.	.	.	.										.
Template Conservation																		.																															.
Template Sequence		D	K	P	N	L	V	C	G	P	V	Q	I	C	W	H	K	.	F	A	R	Y	W	D	V	E	L	R	E	I	P	M	R	P	G	Q	L	F	M	D	P	K	R	M	I	E	A	C	.	D	E	N	T	I	G	V	V	P	T	F	G	V	T	Y	T	G	N	Y	E	F	P	Q	P	L	H	D	A	L	D	K	F
Template Known Secondary structure		S							S	S								.					T	T									B	T	T	B		S											.		T	T							B	B	S		T	T	T		B	B
Template Predicted Secondary structure																		.																															.
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.		.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.		.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		164							.	.	.	.	.	170	.	.	.	.	.	.	.	.	.								180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure			.	.	.	.	.	.																.	.	.	.	.	.	.																					.																							.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.																.	.	.	.	.	.	.																					.																							.	.	.	.	.	.	.	.
Query Sequence		G	.	.	.	.	.	.	V	P	A	L	T	D	D	N	Y	A	V	M	K	V	A	.	.	.	.	.	.	.	R	I	G	C	E	C	G	A	N	V	S	T	F	S	C	F	K	L	F	G	.	P	E	G	V	G	A	V	V	G	D	A	D	V	I	N	R	I	R	A	T	L	Y	.	.	.	.	.	.	.	.
Query Conservation			.	.	.	.	.	.																.	.	.	.	.	.	.																					.																							.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.																.	.	.	.	.	.	.																					.													.	.									.	.	.	.	.	.	.	.
Template Conservation																																																																.	.
Template Sequence		Q	A	D	T	G	I	D	I	D	M	H	I	D	A	A	S	G	G	F	L	A	P	F	V	A	P	D	I	V	W	D	F	R	L	P	R	V	K	S	I	S	A	S	G	H	K	F	G	L	A	P	L	G	C	G	W	V	I	W	R	D	E	.	.	E	A	L	P	Q	E	L	V	F	N	V	D	Y	L	G	G
Template Known Secondary structure																T	T	G	G	G	T						T	T				S	T	T	S	T	T								T	T	T	T	T				S	S							S	S	G	.	.	G	G	S		G	G	G							T	T
Template Predicted Secondary structure																																																																.	.
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.			.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
										222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.			.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.						.
Predicted Secondary structure		.	.	.	.	.	.	.	.																	.	.																																																	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.																	.	.																																																	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	S	G	G	S	Q	I	Q	G	A	Q	A	L	E	V	L	R	.	.	G	L	V	F	A	P	V	M	H	A	V	Q	A	G	V	S	E	R	L	L	A	L	L	N	G	G	A	V	P	E	V	K	S	A	V	I	A	N	A	Q	S	K	V	L	I	V	E	F	.	.	.	.	.	H
Query Conservation		.	.	.	.	.	.	.	.																	.	.																																																	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.																	.	.																																																	.	.	.	.	.
Template Conservation
Template Sequence		Q	I	G	T	F	A	I	N	F	S	R	P	A	G	Q	V	I	A	Q	Y	Y	E	F	L	R	L	G	R	E	G	Y	T	K	V	Q	N	A	S	Y	Q	V	A	A	Y	L	A	D	E	I	A	K	L	G	P	Y	E	F	I	C	T	G	R	P	D	E	G	I	P	A	V	C	F	K	L	K	D	G	E	D	P
Template Known Secondary structure								S			S		B	S																																						T	T	S										T	T	T	B	S	S								T	T
Template Predicted Secondary structure
Template SS confidence
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	P	I	A	A	R	V	L	E	E	A	Q	K	R	G	A	L	P	Y	P	V	G	A	E	S	K	Y	E	I	P	P	L	F	Y	R	L	S	G	T	F	R	Q	A	N	P	Q	S	E	H	C	A	I	R	I	N	P	N	R	S	G	E	E	T	V	L	R	I	L	R	E	S	I	A	S
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	Y	T	L	Y	D	L	S	E	R	L	R	L	R	G	W	Q	V	P	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	T	L	G	G	E	A	T	D	I	V	V	M	R	I	M	C	R	R	G	F	E	M	D	F	A	E	L	L	L	E	D	Y	K	A
Template Known Secondary structure		S	S											T	T	T		B				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T		T	T										T	T
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		389	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.																				.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions