Return to main results Retrieve Phyre Job Id

Job DescriptionP45545
Confidence99.97%DateThu Jan 5 12:03:04 GMT 2012
Rank60Aligned Residues344
% Identity16%Templated1p3wa_
SCOP infoPLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like
Resolution2.10

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30....... ..40.........50.........60.........70..... ....80....
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Query Sequence  QSLTIIEAQQKQFALVDSICRHFPGSEFLTG. GDLGLTPGLNQPRVTQRVEQVLADAFHAQAAALVQGAG. TGAIRAGLA
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Template Sequence  IYLDYSATTPVDPRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLVGADPREIVFTSGATESDNLAIK
Template Known Secondary structure 
BTTT




TTTSTTS



TT
TTST

GGGSS
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   5....10.........20.........30.........40.........50.........60.........70.........80....
 
   85... .90.........100....... ..110.........120....... ..130.........140.........150....
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Query Sequence  ALLK. . . . PGQRLLVHDAPVYPTTRVI. . IEQMGLTLITVDFNDLSALK. . . . QVVDEQQPDAALVQHTRQQPQDSYVLA
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Template Conservation   
                                                                            
 
Template Sequence  GAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQRNGIIDLKELEAAMRDDTILVSIMHVNNEIGVVQDIA
Template Known Secondary structure  GGG

TTS
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TT

SB
TTT

B

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   85....90.........100.........110.........120.........130.........140.........150.........160....
 
   155....160.........170.........180.........190.........200.........210.........220.... ...
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Query Sequence  DVLATLRAAGVPALTDDNYAVMKVARIGCECGANVSTFSCFKLFGPEGVGAVVGDADVINRIRATLYSGG. . . . . . . SQI
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Template Conservation               
 
                      
  
     
 
 
                            
Template Sequence  AIGEMCRARGIIYHVDATQSVGKLPIDLSQLKVDLMSFSGHKIYGPKGIGALYVRRKPRVRIEAQMHGGGHERGMRSGTL
Template Known Secondary structure  T

TTTBTTB


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   165....170.........180.........190.........200.........210.........220.........230.........240....
 
   228.230.........240.........250.........260.........270......... 280.........290.........300....
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Query Sequence  QGAQALEVLRGLVFAPVMHAVQAGVSERLLALLNGGAVPEVKSAVIANAQSK. . . VLIVEFHQPIAARVLEEAQKRGALP
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Template Conservation                                      
                                   
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Template Sequence  PVHQIVGMGEAYRIAKEEMATEMERLRGLRNRLWNGIKDIEEVYLNGDLEHGAPNILNVSFNYVEGESLIMAL. . KDLAV
Template Known Secondary structure 
TTTTSTT
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   245....250.........260.........270.........280.........290.........300.........310....... ..320..
 
   305....310.........320.........330.........340.........350.........360.
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Query Sequence  YPVGAESKYEIPPLFYRLSGTFRQANPQSEHCAIRINPNRSGEETVLRILRESIASI
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Template Sequence  SSGSAEPSYVLR. . . . . . . . . ALGLNDELAHSSIRFSLGRFTTEEEIDYTIELVRKS
Template Known Secondary structure  B






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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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