Job Description P45545 Confidence 100.00% Date Thu Jan 5 12:03:04 GMT 2012 Rank 32 Aligned Residues 313 % Identity 12% Template d1mdoa_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 1.70

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		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.		.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure																																											.
Query SS confidence																																											.
Query Sequence		L	N	Q	P	R	V	T	Q	R	V	E	Q	V	L	A	D	A	F	H	A	Q	A	A	A	L	V	Q	G	A	G	T	G	A	I	R	A	G	L	A	A	L	.	L	K	P	G	Q	R	L	L	V	H	D	A	P	V	Y	P	T	T	R	V	I	I	E	Q	M	G	L	T	L	I	T	V	D	F	N	D	L	S
Query Conservation																																											.
Alig confidence																							.																				.																				.
Template Conservation																							.																																								.
Template Sequence		I	T	T	G	P	K	N	Q	E	L	E	A	A	F	C	R	L	T	G	N	Q	.	Y	A	V	A	V	S	S	A	T	A	G	X	H	I	A	L	X	A	L	G	I	G	E	G	D	E	V	I	T	P	S	X	T	W	V	S	T	L	N	.	X	I	V	L	L	G	A	N	P	V	X	V	D	V	D	R	D	T
Template Known Secondary structure			S	S	S																	S	.						S													T	T			T	T							S	S	S							.					T	T								B		T	T	T
Template Predicted Secondary structure																							.																																								.
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.		.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
		125	.	.			.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.			.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure					.	.																																																									.	.
Query SS confidence					.	.																																																									.	.
Query Sequence		A	L	K	.	.	Q	V	V	D	E	Q	Q	P	D	A	A	L	V	Q	H	T	R	Q	Q	P	Q	D	S	Y	V	L	A	D	V	L	A	T	L	R	A	A	G	V	P	A	L	T	D	D	N	Y	A	V	M	K	V	A	R	I	G	C	.	.	E	C	G	A	N	V	S	T	F	S	C	F	K	L	F	G	P
Query Conservation					.	.																																																									.	.
Alig confidence					.	.																																																									.	.
Template Conservation
Template Sequence		L	X	V	T	P	E	H	I	E	A	A	I	T	P	Q	T	K	A	I	I	P	V	H	Y	A	G	A	P	A	D	L	D	A	I	Y	A	L	G	E	R	Y	G	I	P	V	I	E	D	A	A	H	A	T	G	T	S	Y	K	G	R	H	I	G	A	R	G	T	A	I	F	S	F	H	A	I	K	N	I	T	C
Template Known Secondary structure				B											T	T							B		G	G	G																T			B					T	T		T	T				T	T			T	T	S	S	S								T	T	S	S	S		S
Template Predicted Secondary structure
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
		201		.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.														.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure			.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence			.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	.	G	V	G	A	V	V	G	D	A	D	V	I	N	R	I	R	A	T	L	Y	S	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	S	Q	I	Q	G	A	Q	A	L	E	V	L	R	G	L	V	F	A	P	V	M	H	A	V	Q	A	G	V	S	E	R	L	L	A	L	L	N	G	G	A	V	P
Query Conservation			.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	E	G	G	I	V	V	T	D	N	P	Q	F	A	D	K	L	R	S	L	K	F	H	G	L	G	V	D	Q	A	E	V	L	A	P	G	Y	K	Y	N	L	P	D	L	N	A	A	I	A	L	A	Q	L	Q	K	L	D	A	L	N	A	R	R	A	A	I	A	A	Q	Y	H	Q	A	X	A	D	L	P	F	Q
Template Known Secondary structure		S	S							S												T	B	T	T									S	S				B																	T																					T	S	S
Template Predicted Secondary structure
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
		267	.	.	270	.	.	.	.	.	.	.	.	.	280		.	.	.	.	.	.					.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
Predicted Secondary structure																.							.	.	.	.
Query SS confidence																.							.	.	.	.
Query Sequence		E	V	K	S	A	V	I	A	N	A	Q	S	K	V	.	L	I	V	E	F	H	.	.	.	.	Q	P	I	A	A	R	V	L	E	E	A	Q	K	R	G	A	L	P	Y	P	V	G	A	E	S	K	Y	E	I	P	P	L	F	Y	R	L	S	G	T	F	R	Q	A	N	P	Q	S	E	H	C	A	I	R	I	N
Query Conservation																.							.	.	.	.
Alig confidence																.							.	.	.	.																										.
Template Conservation																																																				.
Template Sequence		P	L	S	L	P	S	W	E	H	I	H	A	W	H	L	F	I	I	R	V	D	E	A	R	C	G	I	T	R	D	A	L	X	A	S	L	K	T	K	G	I	G	T	G	L	H	F	R	A	A	.	H	T	Q	K	Y	Y	R	E	R	F	P	T	L	T	L	P	D	T	E	W	N	S	E	R	I	C	S	L	P
Template Known Secondary structure							S	S							S												S	S												T	T	B			B						G	.	G	G	S							S	T	T											T	T
Template Predicted Secondary structure																																																				.
Template SS confidence
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.		.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
		342	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	N	R	S	G	E	E	T	V	L	R	I	L	R	E	S	I	A	S	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	F	P	D	X	T	E	S	D	F	D	R	V	I	T	A	L	H	Q	I
Template Known Secondary structure				T	T
Template Predicted Secondary structure
Template SS confidence
		363	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions